RdRp

Euk-Vir

Norovirus_GII.17

RdRp__YP_009538339__Norovirus_GII.17__552592

Identity

88.7 mean pLDDT

Orthornavirae› Pisuviricota› Pisoniviricetes› Picornavirales› Caliciviridae› Norovirus› Norovirus_GII.17

TaxID: 552592

View cluster (450 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-71

PDB

Domain cluster: rep: RdRp__YP_009701444__Norovirus_GI__122928__D8-59

D2 medium residues 73-103_213-258_298-392

PDB

Domain cluster: rep: RNA_dependent_RNA_polymerase__YP_529897__Newbury_agent_1__331642__D58-79_192-241_281-399

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00680.26 best	RdRP_1	72.9	3.20e-20	57.0%	21.6%
PF00680.26	RdRP_1	33.8	2.20e-08	34.3%	11.3%

D3 medium residues 104-212_259-297

PDB

Domain cluster: rep: NIa__YP_003620390__Freesia_mosaic_virus__421012__D109-224

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00680.26 best	RdRP_1	75.1	6.90e-21	89.9%	26.0%

D4 medium residues 393-510

PDB

Domain cluster: rep: putative_3D_RNA-dependent_RNA_polymerase__YP_009553719__tremovirus_B1__2058161__D405-481

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00680.26 best	RdRP_1	33.0	4.10e-08	62.7%	13.3%