←Back to structures
RdRp
Euk-VirNorovirus_GII
RdRp__YP_009684405__Norovirus_GII__122929
Identity
- Accession:
- YP_009684405 ↗
- Protein ID:
- RdRp
- Kingdom:
- euk
Quality
88.9
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Pisoniviricetes›
Picornavirales›
Caliciviridae›
Norovirus›
Norovirus_GII
TaxID: 122929
Cluster
View cluster (450 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 405-491
Domain cluster:
rep: putative_3D_RNA-dependent_RNA_polymerase__YP_009553719__tremovirus_B1__2058161__D405-481
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 24.7 | 1.30e-05 | 71.3% | 10.4% |
D2
medium
residues 38-73_160-188
Domain cluster:
rep: RdRp__YP_009684411__Norovirus_dog_GVI.1_HKU_Ca026F_2007_HKG__673457__D32-76_164-188
D3
medium
residues 74-93_220-254_304-404
Domain cluster:
rep: RNA_dependent_RNA_polymerase__YP_529897__Newbury_agent_1__331642__D58-79_192-241_281-399
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 63.5 | 2.20e-17 | 66.7% | 22.9% |
D4
medium
residues 94-159_189-219_255-303
Domain cluster:
rep: RdRp__YP_009238498__Norovirus_GIV__262897__D59-110_188-211_250-301