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Rep-associated_protein
Euk-VirSugarcane_chlorotic_streak_virus
Rep-associated_protein__YP_009325925__Sugarcane_chlorotic_streak_virus__1919062
Identity
- Accession:
- YP_009325925 ↗
- Protein ID:
- Rep-associated_protein
- Kingdom:
- euk
Quality
81.3
mean pLDDT
Taxonomy
Shotokuvirae›
Cressdnaviricota›
Repensiviricetes›
Geplafuvirales›
Geminiviridae›
Mastrevirus›
Sugarcane_chlorotic_streak_virus
TaxID: 1919062
Cluster
View cluster (491 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-118
Domain cluster:
rep: replication-associated_protein__YP_009553348__Odonata-associated_circular_virus-7_Viruses.__X__D5-106
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00799.27 best | Gemini_AL1 | 119.2 | 1.30e-34 | 100.0% | 93.8% |
D2
high
residues 141-184
Domain cluster:
rep: replication_associated_protein__YP_006331073__Maize_streak_Reunion_virus__1182518__D173-216
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08283.17 best | Gemini_AL1_M | 47.3 | 2.80e-12 | 100.0% | 40.2% |
D3
high
residues 206-340
Domain cluster:
rep: IMGVR_UViG_638276918_000001-638276918-638305645__D148-283