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RepA
Euk-VirSaccharum_streak_virus
RepA__YP_003288768__Saccharum_streak_virus__683179
Identity
- Accession:
- YP_003288768 ↗
- Protein ID:
- RepA
- Kingdom:
- euk
Quality
84.0
mean pLDDT
Taxonomy
Shotokuvirae›
Cressdnaviricota›
Repensiviricetes›
Geplafuvirales›
Geminiviridae›
Mastrevirus›
Saccharum_streak_virus
TaxID: 683179
Cluster
View cluster (491 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 19-119
Domain cluster:
rep: replication-associated_protein__YP_009553348__Odonata-associated_circular_virus-7_Viruses.__X__D5-106
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00799.27 best | Gemini_AL1 | 106.0 | 1.60e-30 | 100.0% | 91.1% |
D2
high
residues 142-185
Domain cluster:
rep: replication_associated_protein__YP_006331073__Maize_streak_Reunion_virus__1182518__D173-216
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08283.17 best | Gemini_AL1_M | 45.1 | 1.30e-11 | 100.0% | 40.2% |
D3
high
residues 207-343
Domain cluster:
rep: IMGVR_UViG_638276918_000001-638276918-638305645__D148-283