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RepA
Euk-VirPaspalum_dilatatum_striate_mosaic_virus
RepA__YP_006666524__Paspalum_dilatatum_striate_mosaic_virus__1196236
Identity
- Accession:
- YP_006666524 ↗
- Protein ID:
- RepA
- Kingdom:
- euk
Quality
74.2
mean pLDDT
Taxonomy
Shotokuvirae›
Cressdnaviricota›
Repensiviricetes›
Geplafuvirales›
Geminiviridae›
Mastrevirus›
Paspalum_dilatatum_striate_mosaic_virus
TaxID: 1196236
Cluster
View cluster (34 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 37-137
Domain cluster:
rep: replication-associated_protein__YP_009553348__Odonata-associated_circular_virus-7_Viruses.__X__D5-106
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00799.27 best | Gemini_AL1 | 88.0 | 5.90e-25 | 100.0% | 92.9% |
D2
high
residues 157-199
Domain cluster:
rep: replication_associated_protein__YP_006331073__Maize_streak_Reunion_virus__1182518__D173-216
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08283.17 best | Gemini_AL1_M | 37.8 | 2.40e-09 | 100.0% | 37.4% |
D3
high
residues 216-262
Domain cluster:
rep: RepA__YP_010087740__Eleusine_indica_associated_virus__2596881__D169-214