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RepA
Euk-VirAxonopus_compressus_streak_virus
RepA__YP_009021764__Axonopus_compressus_streak_virus__1476487
Identity
- Accession:
- YP_009021764 ↗
- Protein ID:
- RepA
- Kingdom:
- euk
Quality
74.1
mean pLDDT
Taxonomy
Shotokuvirae›
Cressdnaviricota›
Repensiviricetes›
Geplafuvirales›
Geminiviridae›
Mastrevirus›
Axonopus_compressus_streak_virus
TaxID: 1476487
Cluster
View cluster (34 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-114
Domain cluster:
rep: replication-associated_protein__YP_009553348__Odonata-associated_circular_virus-7_Viruses.__X__D5-106
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00799.27 best | Gemini_AL1 | 89.8 | 1.60e-25 | 100.0% | 88.5% |
D2
medium
residues 163-211
Domain cluster:
rep: replication_associated_protein__YP_006331073__Maize_streak_Reunion_virus__1182518__D173-216
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08283.17 best | Gemini_AL1_M | 30.7 | 3.90e-07 | 100.0% | 42.1% |
D3
medium
residues 223-269
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5im4F00 | 3.40.50.510 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component | 0.60 | 43.0 | 3.13e-01 | 76.6% | 86.3% |