←Back to structures
RepA
Euk-VirRice_latent_virus_2
RepA__YP_009551801__Rice_latent_virus_2__2012857
Identity
- Accession:
- YP_009551801 ↗
- Protein ID:
- RepA
- Kingdom:
- euk
Quality
73.6
mean pLDDT
Taxonomy
Shotokuvirae›
Cressdnaviricota›
Repensiviricetes›
Geplafuvirales›
Geminiviridae›
Mastrevirus›
Rice_latent_virus_2
TaxID: 2012857
Cluster
View cluster (34 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 16-112
Domain cluster:
rep: replication-associated_protein__YP_009553348__Odonata-associated_circular_virus-7_Viruses.__X__D5-106
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00799.27 best | Gemini_AL1 | 75.0 | 6.50e-21 | 100.0% | 88.5% |
D2
medium
residues 158-209
Domain cluster:
rep: replication_associated_protein__YP_006331073__Maize_streak_Reunion_virus__1182518__D173-216
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08283.17 best | Gemini_AL1_M | 28.2 | 2.40e-06 | 94.2% | 43.0% |
D3
medium
residues 223-270
Domain cluster:
rep: RepA__YP_009021764__Axonopus_compressus_streak_virus__1476487__D223-269