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Rep
Euk-VirTomato_severe_rugose_virus
Rep__YP_001294922__Tomato_severe_rugose_virus__158463
Identity
- Accession:
- YP_001294922 ↗
- Protein ID:
- Rep
- Kingdom:
- euk
Quality
82.2
mean pLDDT
Taxonomy
Shotokuvirae›
Cressdnaviricota›
Repensiviricetes›
Geplafuvirales›
Geminiviridae›
Begomovirus›
Tomato_severe_rugose_virus
TaxID: 158463
Cluster
View cluster (491 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-115
Domain cluster:
rep: replication-associated_protein__YP_009553348__Odonata-associated_circular_virus-7_Viruses.__X__D5-106
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00799.27 best | Gemini_AL1 | 196.1 | 1.60e-58 | 100.0% | 93.8% |
D2
high
residues 126-174
Domain cluster:
rep: replication_initiator_protein__YP_009241413__Deinbollia_mosaic_virus__1812308__D128-173
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08283.17 best | Gemini_AL1_M | 42.5 | 8.40e-11 | 98.0% | 44.9% |
D3
high
residues 193-340
Domain cluster:
rep: IMGVR_UViG_638276918_000001-638276918-638305645__D148-283
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08283.17 best | Gemini_AL1_M | 48.1 | 1.50e-12 | 27.0% | 37.4% |