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Rep
Euk-VirTomato_rugose_yellow_leaf_curl_virus
Rep__YP_007438888__Tomato_rugose_yellow_leaf_curl_virus__1162280
Identity
- Accession:
- YP_007438888 ↗
- Protein ID:
- Rep
- Kingdom:
- euk
Quality
82.0
mean pLDDT
Taxonomy
Shotokuvirae›
Cressdnaviricota›
Repensiviricetes›
Geplafuvirales›
Geminiviridae›
Begomovirus›
Tomato_rugose_yellow_leaf_curl_virus
TaxID: 1162280
Cluster
View cluster (491 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-116
Domain cluster:
rep: replication-associated_protein__YP_009553348__Odonata-associated_circular_virus-7_Viruses.__X__D5-106
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00799.27 best | Gemini_AL1 | 138.2 | 1.60e-40 | 100.0% | 92.9% |
D2
high
residues 187-337
Domain cluster:
rep: IMGVR_UViG_638276918_000001-638276918-638305645__D148-283
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08283.17 best | Gemini_AL1_M | 57.4 | 1.90e-15 | 28.5% | 40.2% |
D3
medium
residues 123-186
Domain cluster:
rep: replication_initiator_protein__YP_009241413__Deinbollia_mosaic_virus__1812308__D128-173
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08283.17 best | Gemini_AL1_M | 54.7 | 1.30e-14 | 100.0% | 58.9% |