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Rep
Euk-VirDesmodium_mottle_virus
Rep__YP_009508453__Desmodium_mottle_virus__1960710
Identity
- Accession:
- YP_009508453 ↗
- Protein ID:
- Rep
- Kingdom:
- euk
Quality
81.5
mean pLDDT
Taxonomy
Shotokuvirae›
Cressdnaviricota›
Repensiviricetes›
Geplafuvirales›
Geminiviridae›
Begomovirus›
Desmodium_mottle_virus
TaxID: 1960710
Cluster
View cluster (491 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-114
Domain cluster:
rep: AC1_protein__NP_955735__Euphorbia_leaf_curl_virus__270117__D7-112
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00799.27 best | Gemini_AL1 | 184.3 | 8.00e-55 | 100.0% | 93.8% |
D2
high
residues 125-173
Domain cluster:
rep: replication_initiator_protein__YP_009241413__Deinbollia_mosaic_virus__1812308__D128-173
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08283.17 best | Gemini_AL1_M | 46.8 | 3.80e-12 | 98.0% | 43.9% |
D3
high
residues 186-335
Domain cluster:
rep: IMGVR_UViG_638276918_000001-638276918-638305645__D148-283
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08283.17 best | Gemini_AL1_M | 43.0 | 6.00e-11 | 30.0% | 41.1% |