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Rep
Euk-VirRodent_associated_circovirus_6
Rep__YP_010084724__Rodent_associated_circovirus_6__2560713
Identity
- Accession:
- YP_010084724 ↗
- Protein ID:
- Rep
- Kingdom:
- euk
Quality
88.7
mean pLDDT
Taxonomy
Shotokuvirae›
Cressdnaviricota›
Arfiviricetes›
Cirlivirales›
Circoviridae›
Circovirus›
Circovirus_daga
TaxID: 2560713
Cluster
View cluster (114 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 171-294
Domain cluster:
rep: replication-associated_protein__YP_009001745__Dragonfly_larvae_associated_circular_virus-5_Viruses.__X__D171-266
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00910.29 best | RNA_helicase | 42.5 | 1.10e-10 | 69.3% | 98.1% |
D2
medium
residues 17-110
Domain cluster:
rep: replication_associated_protein__YP_009237599__Lake_Sarah-associated_circular_molecule_10_Viruses.__X__D15-119
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02407.23 best | Viral_Rep | 75.0 | 6.50e-21 | 92.5% | 97.6% |
D3
medium
residues 119-160