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Rep
Euk-VirMurine_adeno-associated_virus_1
Rep__YP_010086819__Murine_adeno-associated_virus_1__2171377
Identity
- Accession:
- YP_010086819 ↗
- Protein ID:
- Rep
- Kingdom:
- euk
Quality
83.4
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Quintoviricetes›
Piccovirales›
Parvoviridae›
Dependoparvovirus›
Murine_adeno-associated_virus_1
TaxID: 2171377
Cluster
View cluster (29 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-189
Domain cluster:
rep: NS1__YP_009507375__Chipmunk_parvovirus__56820__D1-203
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08724.17 best | Rep_N | 175.0 | 2.00e-51 | 99.5% | 98.9% |
D2
medium
residues 214-272
Domain cluster:
rep: Rep_68_protein__YP_680422__adeno-associated_virus_2__10804__D219-282
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01057.24 best | Parvo_NS1 | 52.8 | 4.00e-14 | 100.0% | 21.0% |
D3
medium
residues 322-488
Domain cluster:
rep: MN062720.1__QDP45567.1__SEA_FUZZBUSTER_83__00083__D568-722_747-764
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01057.24 best | Parvo_NS1 | 269.2 | 4.20e-80 | 95.2% | 56.1% |
| PF19263.6 | DUF5906 | 29.2 | 1.80e-06 | 64.1% | 93.8% |