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Rep
Euk-VirMurine_adeno-associated_virus_2
Rep__YP_010086821__Murine_adeno-associated_virus_2__2171378
Identity
- Accession:
- YP_010086821 ↗
- Protein ID:
- Rep
- Kingdom:
- euk
Quality
82.9
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Quintoviricetes›
Piccovirales›
Parvoviridae›
Dependoparvovirus›
Murine_adeno-associated_virus_2
TaxID: 2171378
Cluster
View cluster (29 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-194
Domain cluster:
rep: NS1__YP_009507375__Chipmunk_parvovirus__56820__D1-203
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08724.17 best | Rep_N | 178.0 | 2.40e-52 | 96.4% | 99.5% |
D2
medium
residues 213-269
Domain cluster:
rep: Rep_68_protein__YP_680422__adeno-associated_virus_2__10804__D219-282
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01057.24 best | Parvo_NS1 | 51.8 | 8.10e-14 | 100.0% | 20.3% |
D3
medium
residues 324-485
Domain cluster:
rep: MN062720.1__QDP45567.1__SEA_FUZZBUSTER_83__00083__D568-722_747-764
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01057.24 best | Parvo_NS1 | 236.6 | 3.80e-70 | 95.1% | 56.5% |
| PF19263.6 | DUF5906 | 32.8 | 1.30e-07 | 69.8% | 93.8% |