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Rep_protein
Euk-VirRamie_mosaic_Yunnan_virus
Rep_protein__YP_009269405__Ramie_mosaic_Yunnan_virus__1874886
Identity
- Accession:
- YP_009269405 ↗
- Protein ID:
- Rep_protein
- Kingdom:
- euk
Quality
82.0
mean pLDDT
Taxonomy
Shotokuvirae›
Cressdnaviricota›
Repensiviricetes›
Geplafuvirales›
Geminiviridae›
Begomovirus›
Ramie_mosaic_Yunnan_virus
TaxID: 1874886
Cluster
View cluster (491 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 20-125
Domain cluster:
rep: replication-associated_protein__YP_009553348__Odonata-associated_circular_virus-7_Viruses.__X__D5-106
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00799.27 best | Gemini_AL1 | 185.3 | 3.90e-55 | 100.0% | 92.9% |
D2
high
residues 141-184
Domain cluster:
rep: replication_initiator_protein__YP_009241413__Deinbollia_mosaic_virus__1812308__D128-173
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08283.17 best | Gemini_AL1_M | 44.3 | 2.40e-11 | 100.0% | 42.1% |
D3
high
residues 197-347
Domain cluster:
rep: IMGVR_UViG_638276918_000001-638276918-638305645__D148-283
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08283.17 best | Gemini_AL1_M | 43.4 | 4.30e-11 | 29.8% | 42.1% |