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Replication-associated_protein
Euk-VirTomato_mottle_leaf_curl_virus
Replication-associated_protein__YP_009325937__Tomato_mottle_leaf_curl_virus__172394
Identity
- Accession:
- YP_009325937 ↗
- Protein ID:
- Replication-associated_protein
- Kingdom:
- euk
Quality
83.0
mean pLDDT
Taxonomy
Shotokuvirae›
Cressdnaviricota›
Repensiviricetes›
Geplafuvirales›
Geminiviridae›
Begomovirus›
Tomato_mottle_leaf_curl_virus
TaxID: 172394
Cluster
View cluster (491 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-114
Domain cluster:
rep: replication-associated_protein__YP_009553348__Odonata-associated_circular_virus-7_Viruses.__X__D5-106
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00799.27 best | Gemini_AL1 | 175.6 | 3.80e-52 | 100.0% | 92.9% |
D2
high
residues 192-339
Domain cluster:
rep: IMGVR_UViG_638276918_000001-638276918-638305645__D148-283
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08283.17 best | Gemini_AL1_M | 51.3 | 1.50e-13 | 27.0% | 37.4% |
D3
medium
residues 124-191
Domain cluster:
rep: replication_initiator_protein__YP_009241413__Deinbollia_mosaic_virus__1812308__D128-173
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08283.17 best | Gemini_AL1_M | 83.6 | 1.40e-23 | 97.1% | 61.7% |