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Replication_factor_C_subunit
Euk-VirPandoravirus_macleodensis
Replication_factor_C_subunit__YP_009481432__Pandoravirus_macleodensis__2107707
Identity
- Accession:
- YP_009481432 ↗
- Protein ID:
- Replication_factor_C_subunit
- Kingdom:
- euk
Quality
78.3
mean pLDDT
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 88-233
Domain cluster:
rep: NC_021330__YP_008059651.1__M202-gp129__00089__D21-171
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00004.36 best | AAA | 55.3 | 1.40e-14 | 80.8% | 95.4% |
| PF01443.25 | Viral_helicase1 | 22.2 | 1.60e-04 | 61.0% | 32.0% |
| PF01078.28 | Mg_chelatase | 24.3 | 2.60e-05 | 55.5% | 28.0% |
D2
high
residues 239-300
Domain cluster:
rep: putative_replication_factor_C_small_subunit__YP_007354396__Acanthamoeba_polyphaga_moumouvirus__1269028__D162-222
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6vvoC02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.97 | 92.0 | 9.09e-01 | 100.0% | 95.3% |
| 1iqpA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.93 | 87.0 | 8.60e-01 | 100.0% | 95.3% |
| 3pvsA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.93 | 86.0 | 7.94e-01 | 98.4% | 97.4% |
| 1sxjD02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.91 | 85.0 | 8.14e-01 | 100.0% | 95.7% |
| 1sxjC02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.90 | 83.0 | 8.00e-01 | 100.0% | 95.7% |
| 1njgB01 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.89 | 82.0 | 7.73e-01 | 100.0% | 84.9% |
| 4ciuA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.88 | 81.0 | 5.59e-01 | 100.0% | 95.3% |
| 5vjhB02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.88 | 81.0 | 7.02e-01 | 100.0% | 85.9% |
| 6qs7C01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.88 | 81.0 | 6.17e-01 | 100.0% | 97.0% |
| 2c9oB03 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.86 | 78.0 | 7.08e-01 | 100.0% | 80.7% |
| 3uk6A02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.85 | 77.0 | 6.98e-01 | 100.0% | 80.7% |
| 3zh9B02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.83 | 75.0 | 7.24e-01 | 100.0% | 91.4% |
| 1sxjE02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.83 | 76.0 | 7.53e-01 | 100.0% | 96.9% |
| 3bosA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.83 | 75.0 | 7.31e-01 | 100.0% | 97.0% |
| 1jqjD03 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.83 | 74.0 | 6.64e-01 | 100.0% | 73.3% |
| 2yviA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.82 | 55.0 | 4.81e-01 | 74.2% | 48.3% |
| 1hqcA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.81 | 72.0 | 6.72e-01 | 100.0% | 94.7% |
| 4fwdA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.78 | 70.0 | 6.47e-01 | 100.0% | 92.3% |
| 3sykA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.78 | 69.0 | 6.13e-01 | 100.0% | 92.2% |
| 2v6zM00 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.73 | 64.0 | 6.03e-01 | 100.0% | 93.3% |
| 2kebA00 | 1.10.8.530 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › DNA polymerase alpha-primase, subunit B, N-terminal domain | 0.73 | 64.0 | 5.98e-01 | 100.0% | 83.3% |
| 2kxeA00 | 1.10.8.800 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › D-family DNA polymerase, DP1 subunit N-terminal domain | 0.72 | 60.0 | 5.75e-01 | 93.5% | 80.6% |
| 4ae4A00 | 1.20.120.1920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › UBAP1 SOUBA domain | 0.69 | 56.0 | 4.66e-01 | 100.0% | 50.0% |
| 7wd3A04 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.69 | 60.0 | 5.59e-01 | 100.0% | 88.5% |
| 2yhsA01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.65 | 49.0 | 4.28e-01 | 83.9% | 59.8% |
| 2cruA01 | 1.10.8.140 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › PDCD5, DNA-binding domain | 0.64 | 49.0 | 4.62e-01 | 85.5% | 76.6% |
| 3k8uA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.63 | 45.0 | 3.59e-01 | 77.4% | 36.6% |
| 5cegD00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.61 | 43.0 | 3.75e-01 | 75.8% | 93.1% |
| 4jndA01 | 1.10.1740.220 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › | 0.57 | 47.0 | 3.84e-01 | 96.8% | 63.1% |
| 6umqA01 | 1.20.930.60 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › | 0.57 | 44.0 | 3.74e-01 | 90.3% | 98.3% |
| 1ej5A00 | 3.90.810.10 | Alpha Beta › Alpha-Beta Complex › SerineThreonine-protein kinase PAK-alpha; Chain A › CRIB domain | 0.53 | 42.0 | 3.63e-01 | 91.9% | 68.2% |
ECOD (99)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3548812 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 1.00 | 95.0 | 9.32e-01 | 100.0% | 93.8% |
| 3080975 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.99 | 94.0 | 9.28e-01 | 100.0% | 93.8% |
| 3466646 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.99 | 94.0 | 8.70e-01 | 100.0% | 81.3% |
| 5060756 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.97 | 91.0 | 8.93e-01 | 100.0% | 93.8% |
| 3247646 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.97 | 90.0 | 8.90e-01 | 100.0% | 93.8% |
| 3606743 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.96 | 90.0 | 8.33e-01 | 100.0% | 81.3% |
| 3738684 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.96 | 88.0 | 8.96e-01 | 98.4% | 100.0% |
| 4980405 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.96 | 89.0 | 8.80e-01 | 100.0% | 93.8% |
| 3802314 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.96 | 92.0 | 8.46e-01 | 100.0% | 92.0% |
| 4199378 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.95 | 89.0 | 8.77e-01 | 100.0% | 93.8% |
| 5054243 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.95 | 89.0 | 8.72e-01 | 100.0% | 93.8% |
| 4965689 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.95 | 87.0 | 8.85e-01 | 98.4% | 100.0% |
| 4948160 | 148.1.3.405 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Rep_fac_C | 0.95 | 88.0 | 8.68e-01 | 100.0% | 93.8% |
| 4069825 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.94 | 88.0 | 8.69e-01 | 100.0% | 93.8% |
| 3619511 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.94 | 87.0 | 8.60e-01 | 100.0% | 93.8% |
| 4927213 | 148.1.3.47 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DNAX_ATPase_lid | 0.94 | 84.0 | 8.58e-01 | 98.4% | 98.3% |
| 4994187 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.94 | 87.0 | 8.62e-01 | 100.0% | 93.8% |
| 5031386 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.94 | 87.0 | 8.58e-01 | 100.0% | 93.8% |
| 4979456 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.94 | 87.0 | 8.04e-01 | 100.0% | 81.3% |
| 4966288 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.94 | 87.0 | 8.57e-01 | 100.0% | 93.8% |
| 4017701 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.94 | 89.0 | 7.80e-01 | 100.0% | 92.9% |
| 3932276 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.93 | 87.0 | 8.58e-01 | 100.0% | 93.8% |
| 3821228 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.93 | 88.0 | 8.66e-01 | 100.0% | 95.4% |
| 4029750 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.93 | 86.0 | 8.49e-01 | 100.0% | 93.8% |
| 4579163 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.93 | 85.0 | 7.20e-01 | 98.4% | 63.2% |
| 3728370 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.93 | 88.0 | 7.76e-01 | 100.0% | 92.9% |
| 5046176 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.93 | 86.0 | 8.50e-01 | 100.0% | 93.8% |
| 4027556 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.93 | 88.0 | 8.36e-01 | 100.0% | 90.0% |
| 5028605 | 148.1.3.47 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DNAX_ATPase_lid | 0.93 | 83.0 | 8.43e-01 | 100.0% | 98.3% |
| 4444764 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.93 | 86.0 | 8.18e-01 | 100.0% | 87.1% |
| 5036744 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.93 | 85.0 | 8.15e-01 | 100.0% | 87.1% |
| 4940300 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.93 | 86.0 | 8.44e-01 | 100.0% | 93.8% |
| 5057800 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.93 | 86.0 | 8.44e-01 | 100.0% | 93.8% |
| 5003869 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.93 | 87.0 | 8.56e-01 | 100.0% | 96.9% |
| 4932414 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.93 | 80.0 | 8.16e-01 | 98.4% | 95.0% |
| 3520054 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.92 | 87.0 | 8.59e-01 | 100.0% | 98.5% |
| 3644074 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.92 | 85.0 | 8.42e-01 | 98.4% | 93.8% |
| 3191809 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.92 | 87.0 | 6.97e-01 | 100.0% | 98.2% |
| 4975494 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.92 | 85.0 | 8.40e-01 | 100.0% | 93.8% |
| 4977023 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.92 | 84.0 | 8.04e-01 | 100.0% | 85.7% |
| 4016413 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.92 | 87.0 | 7.64e-01 | 100.0% | 94.1% |
| 3688793 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.92 | 86.0 | 6.91e-01 | 100.0% | 64.5% |
| 5082447 | 148.1.3.47 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DNAX_ATPase_lid | 0.92 | 85.0 | 7.95e-01 | 100.0% | 82.7% |
| 3718345 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.92 | 85.0 | 8.42e-01 | 100.0% | 95.4% |
| 5040775 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.92 | 83.0 | 8.46e-01 | 98.4% | 100.0% |
| 4160285 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.91 | 81.0 | 8.23e-01 | 98.4% | 96.7% |
| 4528166 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.91 | 82.0 | 8.11e-01 | 100.0% | 92.3% |
| 5020254 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.91 | 85.0 | 8.42e-01 | 100.0% | 96.9% |
| 5062561 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.91 | 83.0 | 8.24e-01 | 100.0% | 93.8% |
| 5040633 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.91 | 84.0 | 8.27e-01 | 100.0% | 93.8% |
| 3720295 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.91 | 85.0 | 7.09e-01 | 100.0% | 100.0% |
| 4140805 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.91 | 84.0 | 8.32e-01 | 100.0% | 93.8% |
| 4889454 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.91 | 81.0 | 7.78e-01 | 95.2% | 91.4% |
| 4449599 | 148.1.3.47 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DNAX_ATPase_lid | 0.91 | 84.0 | 8.06e-01 | 100.0% | 88.6% |
| 5027108 | 148.1.3.222 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF27254 | 0.90 | 80.0 | 8.17e-01 | 96.8% | 98.3% |
| 2832150 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.90 | 84.0 | 8.09e-01 | 100.0% | 95.7% |
| 4462629 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.90 | 83.0 | 8.22e-01 | 100.0% | 93.8% |
| 3839830 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.90 | 82.0 | 7.68e-01 | 100.0% | 81.3% |
| 4947827 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.90 | 79.0 | 8.06e-01 | 95.2% | 96.7% |
| 3440546 | 148.1.3.47 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DNAX_ATPase_lid | 0.90 | 82.0 | 7.47e-01 | 100.0% | 76.2% |
| 3621809 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.90 | 82.0 | 7.88e-01 | 98.4% | 87.1% |
| 3164804 | 148.1.3.47 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DNAX_ATPase_lid | 0.90 | 83.0 | 7.96e-01 | 100.0% | 88.6% |
| 3510515 | 148.1.3.47 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DNAX_ATPase_lid | 0.90 | 83.0 | 7.96e-01 | 100.0% | 90.0% |
| 4474463 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.90 | 82.0 | 7.86e-01 | 100.0% | 87.1% |
| 3994437 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.90 | 83.0 | 8.15e-01 | 100.0% | 96.9% |
| 4078005 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.89 | 81.0 | 8.23e-01 | 100.0% | 100.0% |
| 3482017 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.89 | 82.0 | 7.68e-01 | 100.0% | 96.0% |
| 5051561 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.89 | 80.0 | 8.11e-01 | 98.4% | 100.0% |
| 4931896 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.89 | 82.0 | 8.13e-01 | 100.0% | 95.4% |
| 4934350 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.89 | 81.0 | 7.98e-01 | 100.0% | 93.8% |
| 3950635 | 148.1.3.47 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DNAX_ATPase_lid | 0.89 | 82.0 | 7.84e-01 | 100.0% | 90.0% |
| 3742104 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.88 | 78.0 | 7.99e-01 | 100.0% | 100.0% |
| 3793159 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.88 | 81.0 | 8.00e-01 | 100.0% | 95.4% |
| 5058220 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.88 | 78.0 | 7.94e-01 | 96.8% | 98.3% |
| 3387061 | 148.1.3.47 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DNAX_ATPase_lid | 0.88 | 81.0 | 7.98e-01 | 100.0% | 95.4% |
| 4201751 | 148.1.3.21 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_4 | 0.88 | 80.0 | 7.17e-01 | 100.0% | 77.6% |
| 4993112 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.88 | 81.0 | 6.22e-01 | 100.0% | 47.7% |
| 3503914 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.87 | 78.0 | 7.75e-01 | 100.0% | 93.8% |
| 5006918 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.87 | 75.0 | 7.67e-01 | 95.2% | 96.7% |
| 5068486 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.87 | 77.0 | 7.42e-01 | 100.0% | 85.7% |
| 4936540 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.86 | 77.0 | 7.65e-01 | 100.0% | 93.8% |
| 4576684 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.86 | 79.0 | 7.57e-01 | 100.0% | 90.0% |
| 3823847 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.85 | 76.0 | 7.12e-01 | 100.0% | 81.3% |
| 3388508 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.85 | 76.0 | 7.51e-01 | 100.0% | 93.8% |
| 3987908 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.84 | 76.0 | 7.53e-01 | 100.0% | 96.9% |
| 3653509 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.84 | 74.0 | 7.34e-01 | 100.0% | 93.8% |
| 3717789 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.84 | 76.0 | 7.29e-01 | 98.4% | 87.1% |
| 3280605 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.84 | 75.0 | 7.03e-01 | 100.0% | 84.0% |
| 3269672 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.84 | 75.0 | 7.41e-01 | 100.0% | 98.5% |
| 3785772 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.83 | 75.0 | 7.21e-01 | 100.0% | 91.4% |
| 3583536 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.83 | 74.0 | 6.33e-01 | 100.0% | 63.2% |
| 4541765 | 148.1.3.222 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF27254 | 0.83 | 73.0 | 7.20e-01 | 100.0% | 93.8% |
| 4267142 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.82 | 72.0 | 6.82e-01 | 98.4% | 89.3% |
| 3840044 | 2004.1.1.995 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF27254 | 0.82 | 69.0 | 7.03e-01 | 95.2% | 96.7% |
| 5049532 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.82 | 74.0 | 6.91e-01 | 98.4% | 82.7% |
| 4383903 | 148.1.3.18 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › TIP49_C | 0.81 | 72.0 | 6.92e-01 | 100.0% | 88.6% |
| 4379243 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.80 | 71.0 | 7.05e-01 | 100.0% | 98.5% |
| 5082288 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.78 | 68.0 | 6.47e-01 | 100.0% | 84.0% |
| 4984945 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.70 | 57.0 | 5.84e-01 | 96.8% | 98.3% |
D3
high
residues 305-398
Domain cluster:
rep: IMGVR_UViG_3300020357_000170-3300020357-Ga0211611_10025916__D108-198
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08542.17 best | Rep_fac_C | 54.0 | 2.40e-14 | 89.4% | 97.7% |