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RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single.1__X__X__00006
Bact-VirRifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single.1__X__X__00006
Identity
- Kingdom:
- phage
Quality
94.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-92
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6wjaA02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.64 | 59.0 | 5.65e-01 | 100.0% | 99.0% |
| 1gy8B01 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.62 | 57.0 | 5.07e-01 | 100.0% | 94.4% |
| 6dntA02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.61 | 57.0 | 5.33e-01 | 100.0% | 95.4% |
| 6kv9A02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.60 | 55.0 | 5.24e-01 | 100.0% | 95.2% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3992799 | 2003.1.1.150 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase, RmlD_sub_bind | 0.90 | 86.0 | 5.57e-01 | 100.0% | 27.5% |
| None | — | 0.88 | 83.0 | 5.50e-01 | 100.0% | 29.7% | |
| 5030575 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.88 | 82.0 | 5.47e-01 | 98.9% | 29.4% |
| 4980152 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.84 | 78.0 | 5.09e-01 | 100.0% | 26.0% |
| 169313 | 2003.1.1.72 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GDP_Man_Dehyd | 0.84 | 78.0 | 5.11e-01 | 100.0% | 27.4% |
| 4311352 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.84 | 78.0 | 5.12e-01 | 100.0% | 28.7% |
| 3288246 | 2003.1.1.153 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase, GDP_Man_Dehyd | 0.79 | 73.0 | 4.99e-01 | 100.0% | 32.5% |
| 3462383 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.77 | 67.0 | 5.19e-01 | 100.0% | 44.1% |
| 4533354 | 3548.1.1.2 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription submodule Med7N/31 › Mediator of RNA polymerase II transcription submodule Med7N/31 › Mediator of RNA polymerase II transcription submodule Med7N/31 › Med7 | 0.50 | 24.0 | 2.69e-01 | 87.8% | 56.0% |