Back to structures

RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single.1__X__X__00074

Bact-Vir

RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single.1__X__X__00074

Identity

Kingdom:
phage

Quality

67.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 16-86
PDB
CATH (100)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1lvaA04 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 65.0 6.95e-01 88.7% 100.0%
2xkoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 67.0 6.13e-01 95.8% 84.0%
5trdA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 65.0 6.21e-01 94.4% 88.1%
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 62.0 6.07e-01 87.3% 79.5%
1ft9A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 66.0 6.36e-01 94.4% 97.5%
2pjpA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 60.0 6.41e-01 93.0% 100.0%
3dp7B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 66.0 6.06e-01 95.8% 75.3%
2ip2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 64.0 6.04e-01 91.5% 81.0%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 61.0 6.43e-01 85.9% 100.0%
1xd7A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 66.0 5.59e-01 97.2% 60.3%
2r3sB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 63.0 6.04e-01 91.5% 80.2%
2o0yB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 62.0 6.47e-01 93.0% 98.5%
3bj6B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 65.0 5.05e-01 95.8% 47.0%
3majA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 55.0 5.89e-01 84.5% 91.7%
3dv8A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 62.0 6.10e-01 94.4% 91.0%
7bqjA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 62.0 5.97e-01 91.5% 85.2%
2gauA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 63.0 6.08e-01 94.4% 93.8%
1c0wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 59.0 5.85e-01 85.9% 93.2%
1lnwF01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 63.0 5.23e-01 95.8% 54.0%
3b02A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 63.0 5.92e-01 94.4% 87.1%
2nyxB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 64.0 5.05e-01 95.8% 52.8%
2pjpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 58.0 6.20e-01 84.5% 100.0%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 63.0 5.19e-01 95.8% 52.7%
1bjaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 62.0 5.61e-01 97.2% 69.5%
1z05A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 59.0 5.97e-01 88.7% 100.0%
3k69A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 64.0 5.03e-01 98.6% 49.3%
2bgcA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 62.0 5.54e-01 94.4% 77.2%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 63.0 6.34e-01 95.8% 97.2%
2nriB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 65.0 5.99e-01 100.0% 79.3%
4yifF00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 62.0 5.09e-01 95.8% 51.5%
3cdhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 62.0 5.05e-01 94.4% 50.7%
3d0sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 62.0 6.03e-01 94.4% 93.8%
3nrvB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 61.0 5.00e-01 91.5% 53.5%
2a61B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 63.0 5.08e-01 95.8% 52.6%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 62.0 4.97e-01 94.4% 53.6%
1r7jA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 61.0 5.64e-01 94.4% 72.2%
3cuoD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 63.0 5.74e-01 95.8% 74.5%
2qwwC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 63.0 5.06e-01 95.8% 50.0%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 54.0 5.59e-01 80.3% 83.6%
4d7kA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 63.0 5.72e-01 95.8% 84.4%
4em2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 64.0 4.97e-01 97.2% 48.0%
2vxzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 58.0 5.99e-01 87.3% 97.0%
3go5A04 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 58.0 6.11e-01 87.3% 100.0%
1qbjC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 58.0 6.03e-01 87.3% 100.0%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 58.0 6.06e-01 85.9% 100.0%
1zybA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.72 61.0 4.32e-01 94.4% 31.8%
3oopA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 62.0 5.03e-01 97.2% 50.7%
1o3sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 57.0 5.79e-01 85.9% 100.0%
3mczA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 60.0 5.78e-01 93.0% 81.7%
7cluA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 62.0 5.75e-01 95.8% 82.0%
4i2oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 60.0 5.84e-01 94.4% 90.0%
7pzaA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 63.0 5.92e-01 98.6% 91.9%
3s2wG00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 61.0 4.95e-01 95.8% 50.4%
1x1aA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 65.0 4.78e-01 100.0% 78.0%
2ia2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 60.0 6.16e-01 95.8% 98.5%
3lstA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 59.0 5.59e-01 91.5% 77.9%
4ev0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 64.0 6.25e-01 100.0% 100.0%
3bddD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 62.0 5.01e-01 95.8% 59.8%
4o5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 59.0 5.95e-01 93.0% 93.0%
8agaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 60.0 5.01e-01 94.4% 60.3%
2fxaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 61.0 4.71e-01 95.8% 43.6%
2qenA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 59.0 6.00e-01 90.1% 95.7%
1lvaA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 55.0 5.85e-01 84.5% 100.0%
4chuA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 62.0 5.20e-01 100.0% 86.5%
3g3zA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 56.0 5.83e-01 85.9% 100.0%
2h6bA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 61.0 5.48e-01 94.4% 79.2%
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 63.0 5.13e-01 98.6% 81.4%
3e6mA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 61.0 4.80e-01 95.8% 49.3%
2fnaA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 59.0 5.93e-01 93.0% 97.3%
5hvqC02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 60.0 5.45e-01 97.2% 79.6%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 48.0 5.45e-01 71.8% 94.4%
2pexA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 58.0 4.73e-01 95.8% 48.5%
4rgxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 59.0 4.80e-01 94.4% 52.2%
3e97A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 61.0 5.97e-01 98.6% 98.7%
2fmyA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 58.0 5.54e-01 93.0% 93.9%
4kibA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 62.0 5.54e-01 100.0% 76.8%
1zarA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 58.0 5.46e-01 95.8% 83.1%
3by6C01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 56.0 5.48e-01 87.3% 83.1%
2dk5A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 55.0 5.67e-01 87.3% 100.0%
2qlzA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 51.0 5.40e-01 80.3% 90.5%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 59.0 4.79e-01 97.2% 54.0%
1mkmB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 59.0 5.84e-01 100.0% 90.8%
2v9vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 53.0 5.67e-01 84.5% 98.3%
2obpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 59.0 5.66e-01 95.8% 97.5%
5zyrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 58.0 4.57e-01 95.8% 45.0%
5cvrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 57.0 5.41e-01 94.4% 89.3%
2qm3A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 58.0 5.51e-01 95.8% 96.4%
1cf7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 59.0 5.61e-01 97.2% 95.1%
2y75A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 57.0 4.82e-01 100.0% 60.8%
3f8mA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 52.0 5.42e-01 90.1% 95.4%
3c7jA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 52.0 4.85e-01 87.3% 69.2%
4h0eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 51.0 5.17e-01 84.5% 95.7%
3bwgB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 52.0 5.29e-01 88.7% 98.6%
4tv7D01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 56.0 5.29e-01 95.8% 80.0%
3eetA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 49.0 5.13e-01 84.5% 98.5%
1hw1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 54.0 5.32e-01 95.8% 93.3%
2ek5B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 53.0 4.72e-01 95.8% 67.0%
6az6A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 56.0 5.53e-01 100.0% 98.7%
4p9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 50.0 5.11e-01 85.9% 94.0%
3edpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 51.0 5.06e-01 93.0% 90.8%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4996888 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.84 72.0 6.13e-01 100.0% 60.0%
4932848 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.81 67.0 6.14e-01 98.6% 68.8%
5052446 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 69.0 5.83e-01 100.0% 58.3%
4997341 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 67.0 6.95e-01 90.1% 100.0%
5021859 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.79 64.0 6.62e-01 93.0% 95.4%
5073482 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 58.0 5.93e-01 90.1% 80.0%
4941114 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.78 69.0 6.61e-01 95.8% 90.0%
398233 101.1.2.142 alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 0.78 67.0 6.29e-01 94.4% 89.7%
None 0.77 67.0 6.28e-01 94.4% 91.8%
4938492 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 64.0 6.19e-01 93.0% 80.0%
4945311 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 59.0 4.98e-01 83.1% 50.4%
5001236 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.77 64.0 6.65e-01 98.6% 100.0%
4333574 101.1.2.142 alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 0.76 65.0 6.02e-01 93.0% 85.6%
4927033 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.76 64.0 6.02e-01 94.4% 76.5%
5012519 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.76 52.0 5.86e-01 71.8% 92.7%
4947296 101.1.2.905 alpha arrays › HTH › HTH › winged helix domain › DUF4443 0.76 65.0 6.38e-01 95.8% 88.0%
4948727 101.1.2.934 alpha arrays › HTH › HTH › winged helix domain › HVO_A0261_N 0.75 63.0 6.40e-01 94.4% 92.9%
4165105 101.1.2.88 alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.75 64.0 6.07e-01 94.4% 80.0%
4969567 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 64.0 6.09e-01 94.4% 83.5%
4966079 101.1.2.934 alpha arrays › HTH › HTH › winged helix domain › HVO_A0261_N 0.75 64.0 5.65e-01 95.8% 66.0%
3279667 101.1.2.110 alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.75 62.0 6.43e-01 91.5% 98.5%
3602631 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.75 63.0 6.11e-01 94.4% 82.5%
4988663 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.75 63.0 5.97e-01 97.2% 77.6%
4962601 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 63.0 6.26e-01 93.0% 89.3%
4877083 101.1.2.88 alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.74 63.0 5.11e-01 93.0% 53.0%
4928999 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 65.0 5.99e-01 95.8% 78.9%
4943504 101.1.2.877 alpha arrays › HTH › HTH › winged helix domain › BpsA_C 0.74 62.0 5.74e-01 91.5% 86.7%
4228006 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 61.0 5.65e-01 90.1% 77.8%
5008442 101.1.2.728 alpha arrays › HTH › HTH › winged helix domain › PF31122 0.74 62.0 5.79e-01 97.2% 73.3%
3279376 101.1.2.88 alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.74 63.0 5.69e-01 93.0% 72.6%
1175670 101.1.2.142 alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 0.74 62.0 6.05e-01 94.4% 88.7%
4958613 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 64.0 5.73e-01 95.8% 69.0%
2567 101.1.2.142 alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 0.74 63.0 6.08e-01 94.4% 93.8%
224405 101.1.2.142 alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 0.74 63.0 6.02e-01 94.4% 92.7%
5055888 101.1.2.222 alpha arrays › HTH › HTH › winged helix domain › PH0730-like_N 0.74 62.0 6.09e-01 91.5% 88.0%
4991639 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 63.0 6.09e-01 98.6% 83.7%
3731108 101.1.2.88 alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.74 61.0 4.80e-01 90.1% 46.9%
1180068 101.1.2.142 alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 0.74 63.0 5.91e-01 94.4% 87.2%
5021052 101.1.2.728 alpha arrays › HTH › HTH › winged helix domain › PF31122 0.74 64.0 6.22e-01 95.8% 87.3%
4167549 101.1.2.88 alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.74 64.0 5.20e-01 95.8% 58.5%
4668436 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.74 64.0 6.30e-01 95.8% 90.7%
5018202 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 63.0 5.36e-01 94.4% 58.3%
4185879 101.1.2.210 alpha arrays › HTH › HTH › winged helix domain › CggR_N 0.73 64.0 6.02e-01 95.8% 83.5%
4964118 101.1.2.934 alpha arrays › HTH › HTH › winged helix domain › HVO_A0261_N 0.73 64.0 5.67e-01 95.8% 69.0%
4199769 101.1.2.88 alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.73 65.0 4.53e-01 97.2% 66.4%
3955641 101.1.2.734 alpha arrays › HTH › HTH › winged helix domain › AbiEi_2 0.73 64.0 6.06e-01 97.2% 82.4%
4417681 101.1.2.88 alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.73 64.0 5.41e-01 95.8% 63.5%
5048178 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 62.0 5.95e-01 93.0% 85.0%
2686 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.73 61.0 5.64e-01 94.4% 72.2%
4303638 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.73 64.0 6.32e-01 97.2% 96.0%
2140759 101.1.2.142 alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 0.73 62.0 6.08e-01 94.4% 87.2%
3693111 101.1.2.88 alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.73 64.0 4.99e-01 95.8% 52.4%
4968637 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 63.0 6.43e-01 98.6% 98.6%
4139293 101.1.2.546 alpha arrays › HTH › HTH › winged helix domain › Methyltransf_2 0.73 62.0 3.90e-01 95.8% 18.7%
4991464 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 65.0 5.47e-01 100.0% 91.7%
5003653 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 64.0 5.95e-01 100.0% 77.8%
5080018 101.1.2.210 alpha arrays › HTH › HTH › winged helix domain › CggR_N 0.72 61.0 5.70e-01 94.4% 84.4%
4987209 101.1.2.88 alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.72 61.0 5.79e-01 93.0% 78.8%
4010642 101.1.2.6 alpha arrays › HTH › HTH › winged helix domain › GntR 0.72 61.0 6.15e-01 98.6% 94.3%
5039516 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 61.0 5.78e-01 94.4% 84.7%
5037848 101.1.2.950 alpha arrays › HTH › HTH › winged helix domain › PF29171 0.72 57.0 5.60e-01 91.5% 81.3%
2140757 101.1.2.110 alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.72 62.0 5.90e-01 94.4% 86.6%
4180255 101.1.2.88 alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.72 63.0 5.68e-01 95.8% 78.9%
5008053 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.72 62.0 5.48e-01 97.2% 64.8%
5039517 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 61.0 6.20e-01 95.8% 100.0%
3968580 101.1.2.142 alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 0.72 61.0 5.79e-01 94.4% 90.4%
4553385 101.1.2.5 alpha arrays › HTH › HTH › winged helix domain › Crp 0.71 60.0 5.75e-01 94.4% 92.9%
3575293 2011.2.1.13 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › HTH_69 0.71 60.0 4.00e-01 94.4% 63.4%
1175529 101.1.2.142 alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 0.71 64.0 6.12e-01 100.0% 95.1%
4974766 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 61.0 6.00e-01 95.8% 96.0%
4982256 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.71 62.0 5.50e-01 95.8% 71.0%
3944078 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 59.0 5.99e-01 98.6% 94.3%
5065637 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.71 62.0 5.71e-01 100.0% 81.7%
4951644 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 63.0 5.70e-01 100.0% 73.7%
5024114 101.1.2.652 alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C 0.71 61.0 4.88e-01 95.8% 50.7%
4670430 101.1.2.110 alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.71 61.0 5.89e-01 95.8% 85.0%
5073893 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 61.0 5.77e-01 95.8% 81.2%
4973486 101.1.2.63 alpha arrays › HTH › HTH › winged helix domain › FaeA 0.71 63.0 5.66e-01 100.0% 74.0%
5073255 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 60.0 5.35e-01 94.4% 72.0%
5025290 101.1.2.652 alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C 0.71 62.0 5.15e-01 100.0% 80.8%
4978490 101.1.2.88 alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.71 61.0 5.36e-01 95.8% 76.2%
4950831 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 57.0 5.78e-01 98.6% 90.0%
5001553 101.1.2.652 alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C 0.70 60.0 4.88e-01 95.8% 79.3%
5052426 101.1.2.21 alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress 0.70 60.0 4.89e-01 95.8% 53.3%
2807732 101.1.2.142 alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 0.70 60.0 5.89e-01 95.8% 93.6%
4935247 101.1.2.210 alpha arrays › HTH › HTH › winged helix domain › CggR_N 0.70 63.0 5.61e-01 100.0% 73.0%
5032748 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.70 60.0 5.97e-01 95.8% 92.0%
4991895 101.1.2.728 alpha arrays › HTH › HTH › winged helix domain › PF31122 0.70 60.0 5.80e-01 95.8% 90.0%
5072150 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 58.0 5.13e-01 90.1% 64.0%
4966661 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.70 60.0 5.85e-01 95.8% 87.3%
4964369 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 62.0 5.64e-01 100.0% 77.9%
5078476 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 52.0 5.59e-01 85.9% 96.7%
5013587 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 57.0 5.75e-01 97.2% 92.9%
3989292 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 61.0 5.02e-01 100.0% 56.2%
3165017 101.1.2.142 alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 0.69 57.0 5.32e-01 93.0% 85.6%
298007 101.1.2.110 alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.69 59.0 5.93e-01 98.6% 95.8%
4219206 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 59.0 4.15e-01 100.0% 30.7%
4984764 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 59.0 4.30e-01 97.2% 36.9%
4322759 101.1.2.142 alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 0.68 58.0 5.66e-01 97.2% 92.4%
5067037 101.1.2.142 alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 0.67 59.0 5.70e-01 98.6% 90.0%
D2 medium residues 103-156
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4gzrC00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.84 54.0 5.23e-01 77.8% 59.0%
1m5iA00 1.10.287.450 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.70 58.0 4.54e-01 88.9% 46.7%
1n69B00 1.10.225.10 Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like 0.62 44.0 3.85e-01 74.1% 82.5%
1yw5A02 3.10.50.40 Alpha Beta › Roll › Chitinase A; domain 3 › 0.56 39.0 3.07e-01 72.2% 75.4%
5fbtA01 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.52 35.0 2.87e-01 70.4% 91.5%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3180581 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.72 55.0 4.66e-01 90.7% 51.8%
4449117 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.59 54.0 4.64e-01 98.1% 72.5%
3486339 3862.1.1.0 extended segments › Envelope small membrane protein › Envelope small membrane protein › Envelope small membrane protein 0.51 31.0 3.44e-01 72.2% 76.7%
4460385 4095.1.1.1 alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_N 0.50 36.0 2.90e-01 75.9% 96.2%
D3 medium residues 157-227
PDB