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RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single.1__X__X__00282
Bact-VirRifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single.1__X__X__00282
Identity
- Kingdom:
- phage
Quality
76.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 76-140
Domain cluster:
rep: Salt_Pond_R2_restored_H2O_MG_scaffold_3_prodigal-single.1__X__X__00404__D6-84
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF14090.13 best | HTH_39 | 55.8 | 4.50e-15 | 100.0% | 94.3% |
CATH (50)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qlzA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 64.0 | 6.57e-01 | 100.0% | 85.7% |
| 5f7qC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 67.0 | 6.61e-01 | 100.0% | 90.0% |
| 1yyvB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 62.0 | 5.20e-01 | 100.0% | 53.6% |
| 3cuqA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 61.0 | 5.69e-01 | 100.0% | 72.5% |
| 5hs7B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 59.0 | 5.23e-01 | 100.0% | 61.2% |
| 6kf9G01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 59.0 | 5.54e-01 | 100.0% | 76.8% |
| 2vqcA00 | 1.10.10.1470 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › F-112 protein-like | 0.70 | 60.0 | 5.86e-01 | 100.0% | 88.6% |
| 3m05B01 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 46.0 | 4.12e-01 | 86.2% | 50.0% |
| 1fpqA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 58.0 | 4.74e-01 | 100.0% | 57.4% |
| 6abqB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 57.0 | 4.95e-01 | 100.0% | 63.2% |
| 2bkyX00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.63 | 54.0 | 5.01e-01 | 100.0% | 79.1% |
| 1bm9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 53.0 | 4.44e-01 | 100.0% | 59.2% |
| 4esbA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 53.0 | 4.63e-01 | 100.0% | 65.0% |
| 1sqhA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.61 | 48.0 | 3.69e-01 | 100.0% | 35.5% |
| 7ewfA01 | 1.25.40.990 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.60 | 52.0 | 3.58e-01 | 100.0% | 36.9% |
| 3tebB00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.60 | 47.0 | 3.12e-01 | 86.2% | 99.2% |
| 7o4xA01 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 43.0 | 3.76e-01 | 84.6% | 50.5% |
| 1dfaA03 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.60 | 52.0 | 4.62e-01 | 100.0% | 75.8% |
| 3ce8A00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 43.0 | 3.89e-01 | 86.2% | 56.2% |
| 7a6pB01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.59 | 44.0 | 3.61e-01 | 84.6% | 75.4% |
| 3e23A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.59 | 51.0 | 3.67e-01 | 100.0% | 40.9% |
| 2i5tA00 | 3.10.490.10 | Alpha Beta › Roll › Hypothetical upf0131 protein ytfp › Gamma-glutamyl cyclotransferase-like | 0.58 | 41.0 | 3.15e-01 | 76.9% | 64.5% |
| 2gj3A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.58 | 43.0 | 3.70e-01 | 84.6% | 84.9% |
| 2v79A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 51.0 | 4.25e-01 | 100.0% | 56.5% |
| 2ab5B01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.57 | 47.0 | 3.92e-01 | 98.5% | 53.9% |
| 4i5sA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.56 | 44.0 | 3.95e-01 | 89.2% | 96.9% |
| 3duwA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 46.0 | 3.34e-01 | 100.0% | 34.7% |
| 1atnD00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.56 | 46.0 | 3.22e-01 | 100.0% | 25.2% |
| 7n7zA01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.55 | 40.0 | 3.24e-01 | 78.5% | 59.1% |
| 3c6kB03 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 47.0 | 3.46e-01 | 100.0% | 36.4% |
| 3sm3A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 46.0 | 3.31e-01 | 100.0% | 49.5% |
| 2ogkD00 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.54 | 40.0 | 3.19e-01 | 86.2% | 37.3% |
| 2gx8A02 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 42.0 | 3.71e-01 | 86.2% | 59.6% |
| 3c0wA01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.54 | 46.0 | 3.86e-01 | 100.0% | 57.5% |
| 3k3dA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 40.0 | 3.35e-01 | 84.6% | 77.8% |
| 4atnA03 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 45.0 | 3.39e-01 | 100.0% | 39.0% |
| 2go8A01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 35.0 | 3.43e-01 | 86.2% | 60.8% |
| 1fm2B03 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.52 | 34.0 | 3.45e-01 | 84.6% | 66.7% |
| 4wksC02 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.52 | 35.0 | 3.40e-01 | 86.2% | 61.3% |
| 2c42A03 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.52 | 39.0 | 2.81e-01 | 87.7% | 25.5% |
| 7sxqA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.52 | 44.0 | 3.00e-01 | 96.9% | 66.9% |
| 4g2uA00 | 3.40.33.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP | 0.52 | 40.0 | 2.89e-01 | 87.7% | 50.5% |
| 5ib9A01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.52 | 40.0 | 2.79e-01 | 93.8% | 70.9% |
| 4ushA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 41.0 | 3.59e-01 | 96.9% | 57.3% |
| 6j8yC00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.51 | 36.0 | 2.49e-01 | 75.4% | 93.3% |
| 3fi7A02 | 4.10.80.30 | Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › DNA polymerase; domain 6 | 0.51 | 27.0 | 3.23e-01 | 87.7% | 100.0% |
| 4bfeA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 36.0 | 3.39e-01 | 93.8% | 60.5% |
| 1y0hB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 37.0 | 3.30e-01 | 86.2% | 54.1% |
| 6nvxB02 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.50 | 35.0 | 3.29e-01 | 86.2% | 61.0% |
| 3o4oB03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 41.0 | 3.56e-01 | 93.8% | 59.6% |
ECOD (86)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3946274 | 101.1.2.369 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_39 | 0.88 | 83.0 | 5.61e-01 | 100.0% | 32.2% |
| 3965117 | 101.1.2.369 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_39 | 0.88 | 77.0 | 7.77e-01 | 100.0% | 95.4% |
| 3986225 | 101.1.9.32 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › ANT | 0.78 | 61.0 | 4.21e-01 | 83.1% | 27.8% |
| 3762681 | 101.1.2.271 ↗ | alpha arrays › HTH › HTH › winged helix domain › B-block_TFIIIC | 0.78 | 68.0 | 5.53e-01 | 100.0% | 55.2% |
| 3501316 | 101.1.2.271 ↗ | alpha arrays › HTH › HTH › winged helix domain › B-block_TFIIIC | 0.77 | 68.0 | 5.73e-01 | 100.0% | 64.5% |
| 3840294 | 101.1.2.664 ↗ | alpha arrays › HTH › HTH › winged helix domain › B-block_TFIIIC, WH_GTF3C1_N | 0.77 | 68.0 | 4.24e-01 | 100.0% | 19.2% |
| 3483770 | 101.1.2.271 ↗ | alpha arrays › HTH › HTH › winged helix domain › B-block_TFIIIC | 0.77 | 68.0 | 5.04e-01 | 100.0% | 42.4% |
| 3394822 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.76 | 66.0 | 4.76e-01 | 100.0% | 33.8% |
| 3485716 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.76 | 67.0 | 4.82e-01 | 100.0% | 34.7% |
| 4966215 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 68.0 | 5.01e-01 | 100.0% | 39.4% |
| 3597257 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 66.0 | 6.25e-01 | 100.0% | 83.7% |
| None | — | 0.76 | 67.0 | 4.83e-01 | 100.0% | 35.7% | |
| 3550392 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 67.0 | 4.81e-01 | 100.0% | 35.7% |
| 3783244 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.76 | 66.0 | 4.57e-01 | 100.0% | 29.3% |
| 3488429 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.75 | 66.0 | 4.79e-01 | 100.0% | 35.7% |
| 5024520 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 61.0 | 5.15e-01 | 100.0% | 53.6% |
| 5077356 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 65.0 | 5.32e-01 | 100.0% | 62.4% |
| 3223233 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.74 | 64.0 | 4.41e-01 | 100.0% | 28.7% |
| 4951172 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.72 | 62.0 | 5.40e-01 | 100.0% | 61.9% |
| 4940261 | 101.1.2.54 ↗ | alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R | 0.72 | 63.0 | 6.23e-01 | 100.0% | 92.9% |
| 5046134 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 63.0 | 4.91e-01 | 100.0% | 45.5% |
| 3167160 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 61.0 | 3.58e-01 | 100.0% | 11.5% |
| 4987112 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 61.0 | 4.89e-01 | 100.0% | 48.5% |
| 4538612 | 314.1.1.0 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases | 0.71 | 64.0 | 3.93e-01 | 100.0% | 18.2% |
| 4669204 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 60.0 | 3.69e-01 | 100.0% | 14.8% |
| 2898918 | 101.1.2.90 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_9 | 0.71 | 60.0 | 5.15e-01 | 100.0% | 58.3% |
| 3181301 | 101.1.2.569 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF28722 | 0.71 | 61.0 | 4.79e-01 | 100.0% | 55.2% |
| 3556744 | 101.1.2.79 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_I_A49 | 0.71 | 61.0 | 5.89e-01 | 100.0% | 89.3% |
| 4105022 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.70 | 48.0 | 4.29e-01 | 86.2% | 51.1% |
| 5072517 | 101.1.2.26 ↗ | alpha arrays › HTH › HTH › winged helix domain › HxlR | 0.70 | 58.0 | 4.77e-01 | 100.0% | 48.8% |
| 3983446 | 101.1.2.84 ↗ | alpha arrays › HTH › HTH › winged helix domain › CaiF_GrlA | 0.70 | 61.0 | 5.37e-01 | 100.0% | 71.0% |
| 4945595 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 60.0 | 5.09e-01 | 100.0% | 58.3% |
| 5000702 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 60.0 | 5.56e-01 | 100.0% | 74.1% |
| 4994432 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 60.0 | 5.21e-01 | 100.0% | 61.9% |
| 3821254 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.70 | 61.0 | 4.95e-01 | 100.0% | 61.6% |
| 5066984 | 101.1.2.110 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_IclR | 0.68 | 59.0 | 5.59e-01 | 100.0% | 82.5% |
| 3509042 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 60.0 | 4.80e-01 | 100.0% | 70.0% |
| 3639498 | 101.1.2.722 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF6581, PF28722 | 0.67 | 58.0 | 3.57e-01 | 100.0% | 19.0% |
| 3738674 | 101.1.2.207 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFC3_eWH | 0.67 | 58.0 | 4.93e-01 | 100.0% | 74.5% |
| 3200375 | 101.1.2.569 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF28722 | 0.66 | 56.0 | 3.80e-01 | 100.0% | 28.7% |
| 3467443 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.66 | 57.0 | 4.78e-01 | 100.0% | 59.1% |
| 3727442 | 101.1.2.569 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF28722 | 0.65 | 55.0 | 4.60e-01 | 100.0% | 64.0% |
| 3964912 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.65 | 44.0 | 4.28e-01 | 86.2% | 62.2% |
| 4991896 | 328.1.1.1 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › Alba | 0.65 | 56.0 | 5.15e-01 | 100.0% | 84.1% |
| 5079724 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 54.0 | 4.69e-01 | 100.0% | 60.0% |
| 5080275 | 101.1.2.914 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF6015 | 0.65 | 52.0 | 4.31e-01 | 98.5% | 49.2% |
| 3196489 | 328.7.1.1 ↗ | a+b two layers › IF3-like › Smr domain › Smr domain › Smr | 0.64 | 56.0 | 4.77e-01 | 100.0% | 65.5% |
| 3780446 | 101.1.2.172 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_53 | 0.64 | 54.0 | 4.67e-01 | 100.0% | 77.3% |
| 3741660 | 2003.1.5.73 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 | 0.64 | 55.0 | 3.62e-01 | 100.0% | 24.5% |
| 5065326 | 328.1.1.0 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like | 0.63 | 54.0 | 4.88e-01 | 100.0% | 76.8% |
| 4980535 | 101.1.2.914 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF6015 | 0.63 | 51.0 | 4.55e-01 | 98.5% | 62.1% |
| 5026790 | 328.1.1.1 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › Alba | 0.62 | 54.0 | 4.74e-01 | 100.0% | 73.0% |
| 3520570 | 328.1.1.1 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › Alba | 0.62 | 53.0 | 4.56e-01 | 100.0% | 67.3% |
| 5040946 | 101.1.2.914 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF6015 | 0.62 | 50.0 | 4.60e-01 | 98.5% | 69.4% |
| 5025980 | 101.1.2.914 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF6015 | 0.62 | 49.0 | 4.51e-01 | 98.5% | 65.6% |
| 3657448 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.61 | 52.0 | 4.13e-01 | 100.0% | 45.7% |
| 5039496 | 101.1.2.914 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF6015 | 0.61 | 48.0 | 4.43e-01 | 98.5% | 65.6% |
| 4934212 | 328.1.1.1 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › Alba | 0.61 | 53.0 | 4.74e-01 | 100.0% | 78.9% |
| 3381087 | 2003.1.5.115 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_29 | 0.61 | 48.0 | 3.18e-01 | 100.0% | 19.0% |
| 4948199 | 328.1.1.0 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like | 0.60 | 51.0 | 4.61e-01 | 100.0% | 77.9% |
| 4979177 | 328.1.1.1 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › Alba | 0.60 | 53.0 | 4.65e-01 | 100.0% | 75.0% |
| 4028991 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.60 | 52.0 | 3.22e-01 | 96.9% | 22.1% |
| 4960088 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.60 | 48.0 | 3.97e-01 | 89.2% | 85.8% |
| 3229998 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.60 | 44.0 | 3.32e-01 | 81.5% | 53.9% |
| 3175261 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 45.0 | 4.70e-01 | 84.6% | 100.0% |
| 169085 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.59 | 51.0 | 3.68e-01 | 100.0% | 41.1% |
| 5029542 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.58 | 50.0 | 4.30e-01 | 100.0% | 60.0% |
| 4069824 | 101.1.9.20 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › PhetRS_B1 | 0.58 | 42.0 | 3.98e-01 | 83.1% | 62.4% |
| 3608304 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 47.0 | 4.10e-01 | 96.9% | 72.7% |
| 286927 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.57 | 47.0 | 3.87e-01 | 98.5% | 51.5% |
| 5029814 | 328.1.1.1 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › Alba | 0.56 | 45.0 | 4.52e-01 | 87.7% | 87.7% |
| 4935371 | 327.11.2.87 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › FLAD1_M | 0.56 | 38.0 | 3.73e-01 | 81.5% | 64.3% |
| 5049353 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.56 | 47.0 | 3.90e-01 | 98.5% | 56.8% |
| 3949585 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.55 | 47.0 | 3.98e-01 | 100.0% | 65.2% |
| 5037829 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.55 | 43.0 | 3.76e-01 | 86.2% | 56.0% |
| 4969506 | 304.51.1.7 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR_Cas6 | 0.54 | 44.0 | 3.47e-01 | 92.3% | 61.5% |
| 3391149 | 3937.1.1.2 ↗ | alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin | 0.53 | 43.0 | 2.65e-01 | 86.2% | 58.9% |
| 3469919 | 230.2.1.1 ↗ | a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › Ribosomal_S3_C | 0.53 | 40.0 | 3.93e-01 | 89.2% | 81.3% |
| 4169399 | 304.14.1.1 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR | 0.53 | 40.0 | 3.82e-01 | 83.1% | 69.6% |
| 3392234 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.52 | 45.0 | 3.22e-01 | 100.0% | 51.9% |
| 4954449 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.52 | 44.0 | 3.93e-01 | 98.5% | 88.9% |
| 5043596 | 304.15.1.0 ↗ | a+b two layers › Alpha-beta plaits › Viral DNA-binding domain › Viral DNA-binding domain | 0.52 | 41.0 | 3.46e-01 | 87.7% | 77.4% |
| 3229770 | 70.3.1.13 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET_TTL | 0.52 | 45.0 | 3.19e-01 | 100.0% | 62.4% |
| 4399128 | 7581.1.1.30 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Thiolase_N, ketoacyl-synt, Thiolase_C | 0.51 | 41.0 | 2.64e-01 | 95.4% | 57.3% |
| 4127225 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.51 | 40.0 | 3.48e-01 | 93.8% | 62.6% |
| 3523036 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.50 | 41.0 | 3.56e-01 | 95.4% | 58.2% |