RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single.1XX__00348

Bact-Vir

RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single.1__X__X__00348

Identity

92.2 mean pLDDT

Singleton — not in a non-trivial cluster

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 21-87

PDB

Domain cluster: representative

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3fcnA00	1.20.1220.20	Mainly Alpha › Up-down Bundle › Malate Synthase G; Chain: A; Domain 4 › Uncharcterised protein PF01724	0.61	43.0	3.29e-01	74.6%	48.7%
3vkgA15	1.10.8.1220	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 ›	0.60	46.0	4.19e-01	100.0%	61.7%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3476412	192.29.1.0 ↗	alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding)	0.72	48.0	4.92e-01	70.1%	100.0%
3797019	219.1.1.0 ↗	a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases	0.62	50.0	3.26e-01	92.5%	20.0%
3494038	5050.1.1.0 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter	0.57	42.0	3.37e-01	80.6%	45.7%
4039423	192.29.1.114 ↗	alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Mitofilin	0.54	40.0	3.00e-01	77.6%	64.4%
3440194	601.3.1.4 ↗	alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain › PTPLA	0.53	44.0	3.11e-01	92.5%	55.8%