←Back to structures
RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single.1__X__X__00358
Bact-VirRifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single.1__X__X__00358
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 20-70
Domain cluster:
representative
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4269713 | 375.14.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) | 0.64 | 47.0 | 4.94e-01 | 98.0% | 95.6% |
| 4104506 | 375.14.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) | 0.61 | 46.0 | 4.76e-01 | 98.0% | 95.6% |
| 3194892 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.52 | 39.0 | 2.30e-01 | 88.2% | 18.0% |
| 5043979 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 43.0 | 3.95e-01 | 100.0% | 74.3% |
| 5054973 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.52 | 44.0 | 4.06e-01 | 100.0% | 94.1% |
| 3667071 | 7574.1.1.8 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Transket_pyr | 0.52 | 35.0 | 2.76e-01 | 76.5% | 53.1% |
| 4179068 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 40.0 | 3.97e-01 | 96.1% | 96.4% |