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RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single.1__X__X__00406
Bact-VirRifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single.1__X__X__00406
Identity
- Kingdom:
- phage
Quality
82.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-81_138-184
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6m3aA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 28.0 | 3.70e-01 | 80.5% | 93.9% |
| 1o5uA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 29.0 | 3.36e-01 | 89.1% | 75.0% |
| 2i45D00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 29.0 | 3.25e-01 | 88.3% | 71.7% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2028252 | 3986.2.1.1 ↗ | a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd › Dmd | 0.55 | 27.0 | 3.63e-01 | 70.3% | 92.2% |
| 3562629 | 221.1.1.113 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA_3 | 0.50 | 35.0 | 3.62e-01 | 71.9% | 90.0% |
D2
medium
residues 82-137
Domain cluster:
representative