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RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single.1__X__X__00488
Bact-VirRifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single.1__X__X__00488
Identity
- Kingdom:
- phage
Quality
91.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-106
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ebmA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.62 | 49.0 | 4.60e-01 | 91.3% | 69.5% |
| 4pn0C00 | 3.20.100.10 | Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › mRNA triphosphatase Cet1-like | 0.61 | 46.0 | 3.47e-01 | 79.8% | 64.1% |
| 2p0wA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.60 | 49.0 | 4.53e-01 | 88.5% | 77.4% |
| 4xmeA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.59 | 43.0 | 3.60e-01 | 76.9% | 81.0% |
| 7a0hA02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.57 | 49.0 | 4.11e-01 | 93.3% | 75.9% |
| 2dayA01 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.57 | 47.0 | 4.64e-01 | 93.3% | 85.8% |
| 6f1uK02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.56 | 48.0 | 4.30e-01 | 93.3% | 73.1% |
| 1mmuA00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.56 | 43.0 | 3.06e-01 | 83.7% | 69.0% |
| 7mhuA01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.55 | 49.0 | 3.36e-01 | 98.1% | 93.0% |
| 4akrA02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.55 | 46.0 | 4.18e-01 | 93.3% | 74.1% |
| 3ebyA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 38.0 | 3.45e-01 | 88.5% | 49.7% |
| 5ktaA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 45.0 | 3.86e-01 | 95.2% | 96.6% |
| 4dooA01 | 3.50.70.10 | Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › | 0.54 | 43.0 | 3.90e-01 | 89.4% | 93.3% |
| 2yzcA00 | 3.10.270.10 | Alpha Beta › Roll › Urate Oxidase › Urate Oxidase; | 0.53 | 44.0 | 3.24e-01 | 91.3% | 58.2% |
| 2gcuA01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.53 | 39.0 | 3.05e-01 | 81.7% | 34.6% |
| 2e1qC05 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.52 | 42.0 | 4.04e-01 | 88.5% | 90.7% |
| 3zhaQ02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.51 | 40.0 | 3.73e-01 | 83.7% | 98.5% |
| 3ga2A00 | 3.30.2170.10 | Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily | 0.51 | 44.0 | 3.49e-01 | 100.0% | 77.5% |
| 4qn0B00 | 3.40.570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Extracellular Endonuclease; Chain A › Extracellular Endonuclease, subunit A | 0.51 | 43.0 | 3.33e-01 | 94.2% | 79.9% |
| 3gocA00 | 3.30.2170.10 | Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily | 0.50 | 44.0 | 3.49e-01 | 100.0% | 76.3% |
| 2b1xB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 36.0 | 3.17e-01 | 89.4% | 47.9% |
| 3b5hA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 35.0 | 3.93e-01 | 96.2% | 91.5% |
| 3natA01 | 3.40.50.11250 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Protein of unknown function DUF3013 | 0.50 | 39.0 | 3.50e-01 | 83.7% | 80.3% |
ECOD (51)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3703973 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.70 | 42.0 | 3.85e-01 | 75.0% | 47.7% |
| 4029709 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.68 | 55.0 | 5.14e-01 | 94.2% | 71.2% |
| 3593049 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.63 | 51.0 | 4.06e-01 | 87.5% | 44.8% |
| 3701306 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.63 | 51.0 | 4.05e-01 | 87.5% | 44.8% |
| 3816742 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.62 | 44.0 | 3.02e-01 | 100.0% | 23.4% |
| 3424963 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.61 | 47.0 | 4.10e-01 | 80.8% | 58.1% |
| 3693112 | 213.1.1.77 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1, Acetyltransf_7 | 0.61 | 48.0 | 3.49e-01 | 84.6% | 64.5% |
| 3585847 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.60 | 50.0 | 4.67e-01 | 93.3% | 77.0% |
| 3476117 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.60 | 51.0 | 4.92e-01 | 92.3% | 82.6% |
| 3335487 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.60 | 49.0 | 4.29e-01 | 88.5% | 81.9% |
| 3505094 | 213.1.1.5 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › MOZ_SAS | 0.60 | 47.0 | 4.24e-01 | 82.7% | 82.1% |
| 3499540 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.60 | 49.0 | 4.28e-01 | 88.5% | 77.5% |
| 3220519 | 213.1.1.22 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Hat1_N | 0.60 | 50.0 | 4.36e-01 | 91.3% | 90.0% |
| 3263663 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.60 | 49.0 | 4.18e-01 | 86.5% | 80.0% |
| 3357649 | 213.1.1.5 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › MOZ_SAS | 0.60 | 49.0 | 4.23e-01 | 89.4% | 78.8% |
| 3626566 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.60 | 49.0 | 4.82e-01 | 93.3% | 83.5% |
| 3990957 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.59 | 50.0 | 4.60e-01 | 92.3% | 74.8% |
| 3690327 | 4099.1.1.2 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Spindle_Spc25 | 0.59 | 45.0 | 4.45e-01 | 94.2% | 77.3% |
| 3510355 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.59 | 48.0 | 4.64e-01 | 91.3% | 78.3% |
| 3820181 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.59 | 50.0 | 4.61e-01 | 93.3% | 73.3% |
| 3270456 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.59 | 47.0 | 3.87e-01 | 87.5% | 53.3% |
| 3790600 | 213.1.1.2 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1,Hat1_N | 0.59 | 48.0 | 4.11e-01 | 88.5% | 70.9% |
| 3793375 | 213.1.1.2 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1,Hat1_N | 0.58 | 47.0 | 4.23e-01 | 88.5% | 78.0% |
| 3255320 | 4096.1.1.1 ↗ | a+b two layers › NAP-like › NAP-like › NAP-like › NAP | 0.58 | 47.0 | 3.91e-01 | 97.1% | 48.6% |
| 3254677 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.58 | 46.0 | 4.58e-01 | 93.3% | 81.8% |
| 3399255 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.58 | 49.0 | 4.77e-01 | 92.3% | 83.5% |
| 3783310 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.58 | 46.0 | 3.75e-01 | 85.6% | 60.1% |
| 3723442 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.57 | 46.0 | 4.34e-01 | 93.3% | 71.5% |
| 3920826 | 844.1.1.4 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Scramblase | 0.57 | 43.0 | 3.67e-01 | 87.5% | 49.4% |
| 3967619 | 244.3.1.6 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › TSCPD | 0.57 | 44.0 | 4.24e-01 | 84.6% | 90.8% |
| 3815916 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.56 | 47.0 | 4.30e-01 | 92.3% | 72.9% |
| 3727036 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.56 | 45.0 | 4.34e-01 | 94.2% | 75.8% |
| 3552620 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.55 | 46.0 | 4.42e-01 | 93.3% | 80.8% |
| 3631881 | 868.1.1.10 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › DUF7905 | 0.55 | 42.0 | 3.01e-01 | 81.7% | 51.9% |
| 3586413 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.55 | 43.0 | 4.03e-01 | 83.7% | 72.3% |
| 3738591 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.55 | 44.0 | 4.10e-01 | 92.3% | 67.1% |
| 3543955 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.55 | 46.0 | 3.42e-01 | 91.3% | 70.4% |
| 3456369 | 897.1.1.1 ↗ | a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 | 0.54 | 44.0 | 3.64e-01 | 88.5% | 58.9% |
| 3960625 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.53 | 38.0 | 3.38e-01 | 73.1% | 51.3% |
| 3960415 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.53 | 39.0 | 3.75e-01 | 76.9% | 71.7% |
| 4303165 | 5087.1.1.0 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-2 › Lipovitellin LV-2 | 0.53 | 41.0 | 3.36e-01 | 82.7% | 66.0% |
| 3584223 | 5.1.5.64 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DCAF17 | 0.53 | 43.0 | 2.83e-01 | 89.4% | 24.4% |
| 3694785 | 4099.1.1.10 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med1 | 0.52 | 44.0 | 3.55e-01 | 94.2% | 64.2% |
| 5043415 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.52 | 39.0 | 3.74e-01 | 87.5% | 68.3% |
| 3616431 | 5.1.4.103 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DCAF17 | 0.52 | 43.0 | 2.78e-01 | 89.4% | 23.4% |
| 4017244 | 3385.1.1.2 ↗ | beta barrels › Allergen Alt a 1 › Allergen Alt a 1 › Allergen Alt a 1 › PF27986 | 0.51 | 45.0 | 4.25e-01 | 99.0% | 94.4% |
| 3461283 | 77.1.1.8 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › PF28611 | 0.51 | 38.0 | 3.99e-01 | 79.8% | 100.0% |
| 3903857 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.51 | 40.0 | 2.67e-01 | 85.6% | 37.7% |
| 3464033 | 844.1.1.2 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR | 0.50 | 43.0 | 3.62e-01 | 96.2% | 95.7% |
| 3915628 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.50 | 39.0 | 2.63e-01 | 85.6% | 48.6% |
| 4124957 | 2484.1.1.43 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 | 0.50 | 44.0 | 3.51e-01 | 100.0% | 79.5% |
D2
medium
residues 116-161
Domain cluster:
representative
CATH (61)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3egrA00 | 3.10.20.520 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phenylacetic acid degradation B | 0.76 | 64.0 | 5.79e-01 | 95.7% | 87.3% |
| 2wshA00 | 3.40.1440.40 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › | 0.75 | 64.0 | 4.63e-01 | 97.8% | 61.2% |
| 3oqgA00 | 3.40.1440.50 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › | 0.71 | 59.0 | 4.05e-01 | 97.8% | 39.2% |
| 1dyqA02 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.70 | 55.0 | 4.03e-01 | 93.5% | 74.6% |
| 1yd0A00 | 3.40.1440.10 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.69 | 56.0 | 4.71e-01 | 97.8% | 65.2% |
| 2pw9C03 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.69 | 54.0 | 3.98e-01 | 93.5% | 35.5% |
| 1d2oA01 | 2.60.40.1140 | Mainly Beta › Sandwich › Immunoglobulin-like › Collagen-binding surface protein Cna, B-type domain | 0.68 | 58.0 | 4.46e-01 | 97.8% | 47.7% |
| 1ti2B03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 52.0 | 4.41e-01 | 95.7% | 50.0% |
| 2vsdA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 55.0 | 4.43e-01 | 97.8% | 52.7% |
| 2a74A05 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.65 | 53.0 | 4.20e-01 | 97.8% | 47.6% |
| 1z0sA02 | 2.60.200.30 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › Probable inorganic polyphosphate/atp-NAD kinase; domain 2 | 0.64 | 51.0 | 3.83e-01 | 93.5% | 62.4% |
| 2r6fA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.64 | 52.0 | 4.52e-01 | 93.5% | 68.1% |
| 7t7zA01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.63 | 53.0 | 3.79e-01 | 100.0% | 40.5% |
| 4eskC00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 51.0 | 4.07e-01 | 93.5% | 48.0% |
| 3cu7A05 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.63 | 52.0 | 4.09e-01 | 97.8% | 47.2% |
| 3h20A01 | 3.30.1490.240 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain | 0.63 | 51.0 | 4.65e-01 | 97.8% | 72.7% |
| 1zczA02 | 3.40.140.20 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › AICAR transformylase, duplication domain | 0.62 | 47.0 | 3.74e-01 | 93.5% | 39.3% |
| 1s4dE02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.62 | 50.0 | 3.70e-01 | 97.8% | 35.3% |
| 2h41A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 50.0 | 4.14e-01 | 100.0% | 53.7% |
| 2l0dA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 50.0 | 3.88e-01 | 97.8% | 48.2% |
| 4ehiA02 | 3.40.140.20 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › AICAR transformylase, duplication domain | 0.61 | 48.0 | 3.51e-01 | 97.8% | 60.3% |
| 2pn5A05 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.61 | 50.0 | 4.06e-01 | 97.8% | 51.0% |
| 3ocpB00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.61 | 51.0 | 3.72e-01 | 95.7% | 33.6% |
| 2wngA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 50.0 | 4.18e-01 | 97.8% | 57.5% |
| 3eb7A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.60 | 48.0 | 3.43e-01 | 97.8% | 37.8% |
| 7y8sB03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 50.0 | 4.24e-01 | 100.0% | 56.0% |
| 5tgfD00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.60 | 44.0 | 2.68e-01 | 80.4% | 30.1% |
| 1ywlA00 | 3.40.1440.10 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.60 | 50.0 | 4.08e-01 | 100.0% | 57.3% |
| 5d1oA02 | 3.30.1490.70 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.60 | 48.0 | 4.32e-01 | 97.8% | 64.4% |
| 2q3xA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.60 | 49.0 | 3.61e-01 | 100.0% | 36.6% |
| 3ld7A00 | 2.60.320.10 | Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › N-utilization substance G protein NusG, insert domain | 0.60 | 49.0 | 4.06e-01 | 95.7% | 98.9% |
| 1cbfA02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.60 | 47.0 | 3.66e-01 | 97.8% | 38.8% |
| 2vvfA01 | 2.60.120.730 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 48.0 | 3.52e-01 | 95.7% | 57.4% |
| 3tp4B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 49.0 | 4.04e-01 | 100.0% | 51.6% |
| 1pk6C00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 48.0 | 3.58e-01 | 95.7% | 38.0% |
| 4gxbA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.59 | 45.0 | 3.77e-01 | 93.5% | 78.4% |
| 1pgsA02 | 2.60.120.230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 48.0 | 3.35e-01 | 97.8% | 43.4% |
| 1yq2A04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 47.0 | 3.70e-01 | 100.0% | 51.3% |
| 3vpbA02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.58 | 46.0 | 4.19e-01 | 97.8% | 71.0% |
| 4bwsF00 | 3.30.1490.40 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain | 0.58 | 46.0 | 4.23e-01 | 97.8% | 70.1% |
| 1ci9A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.57 | 40.0 | 2.44e-01 | 78.3% | 40.6% |
| 2hvwA00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.57 | 43.0 | 3.31e-01 | 97.8% | 50.3% |
| 4gb7A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.57 | 40.0 | 2.46e-01 | 82.6% | 59.8% |
| 4b6eB01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.57 | 44.0 | 3.04e-01 | 93.5% | 23.3% |
| 5h4cB00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 47.0 | 3.47e-01 | 97.8% | 63.7% |
| 6se8A04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 45.0 | 3.67e-01 | 100.0% | 57.4% |
| 5lf5A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 44.0 | 3.83e-01 | 95.7% | 53.0% |
| 4d7yA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 46.0 | 3.46e-01 | 97.8% | 38.9% |
| 2xbzA00 | 2.60.40.2380 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 47.0 | 3.49e-01 | 97.8% | 36.4% |
| 2jveA00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.56 | 43.0 | 3.93e-01 | 97.8% | 66.2% |
| 3glkA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.56 | 42.0 | 4.05e-01 | 93.5% | 72.9% |
| 4f3jA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 43.0 | 3.24e-01 | 95.7% | 37.1% |
| 3k5iA02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.54 | 39.0 | 3.65e-01 | 89.1% | 60.0% |
| 1qhdA01 | 2.60.120.170 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 40.0 | 2.89e-01 | 100.0% | 23.5% |
| 3orqA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.54 | 43.0 | 3.96e-01 | 95.7% | 68.3% |
| 1ynjJ01 | 1.10.1790.20 | Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › | 0.54 | 43.0 | 3.40e-01 | 100.0% | 49.1% |
| 3loiA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 45.0 | 3.18e-01 | 100.0% | 28.7% |
| 3d33A00 | 2.60.40.3080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 41.0 | 3.52e-01 | 100.0% | 52.1% |
| 1tg7A04 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 43.0 | 3.00e-01 | 97.8% | 29.4% |
| 2pifA01 | 3.40.1640.10 | Alpha Beta › 3-Layer(aba) Sandwich › PSTPO5379-like › PSTPO5379-like | 0.52 | 41.0 | 3.10e-01 | 100.0% | 78.9% |
| 2q18X02 | 3.90.850.10 | Alpha Beta › Alpha-Beta Complex › Fumarylacetoacetate hydrolase; domain 2 › Fumarylacetoacetase-like, C-terminal domain | 0.51 | 40.0 | 2.77e-01 | 100.0% | 57.5% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4959201 | 815.1.1.1 ↗ | a+b two layers › Chromosomal protein MC1 › Chromosomal protein MC1 › Chromosomal protein MC1 › MC1 | 0.86 | 75.0 | 5.79e-01 | 95.7% | 48.4% |
| 5014007 | 3115.2.1.0 ↗ | a+b two layers › GP2-like › GP2 › GP2 | 0.86 | 78.0 | 7.35e-01 | 100.0% | 98.2% |
| 5003527 | 2492.1.1.7 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › FdhD-NarQ | 0.74 | 60.0 | 4.26e-01 | 95.7% | 34.0% |
| 5001166 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.74 | 62.0 | 4.55e-01 | 100.0% | 37.0% |
| 4977317 | 821.1.1.9 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › PF30054 | 0.73 | 60.0 | 4.56e-01 | 97.8% | 50.4% |
| 4515517 | 821.1.1.9 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › PF30054 | 0.72 | 59.0 | 4.89e-01 | 97.8% | 66.7% |
| 403748 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.71 | 59.0 | 4.08e-01 | 97.8% | 40.6% |
| 5070409 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.71 | 58.0 | 4.82e-01 | 97.8% | 62.5% |
| 4964937 | 821.1.1.15 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › DUF7508 | 0.71 | 59.0 | 5.24e-01 | 97.8% | 70.0% |
| 5052958 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.70 | 58.0 | 4.98e-01 | 97.8% | 63.7% |
| 5070656 | 821.1.1.15 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › DUF7508 | 0.70 | 58.0 | 4.84e-01 | 97.8% | 55.3% |
| 4980287 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.69 | 57.0 | 4.78e-01 | 97.8% | 56.5% |
| 1031012 | 2492.1.1.7 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › FdhD-NarQ | 0.69 | 53.0 | 3.90e-01 | 93.5% | 33.3% |
| 3715676 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 58.0 | 4.69e-01 | 100.0% | 51.1% |
| 4080563 | 4004.1.1.3 ↗ | beta sandwiches › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD_kinase_C | 0.67 | 56.0 | 3.88e-01 | 100.0% | 80.6% |
| 3184735 | 76.1.1.0 ↗ | beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I | 0.67 | 55.0 | 4.09e-01 | 100.0% | 39.6% |
| 4968752 | 11.1.1.1410 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CarboxypepD_reg | 0.67 | 51.0 | 4.00e-01 | 95.7% | 37.3% |
| 3882303 | 73.1.1.1 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA | 0.66 | 56.0 | 4.02e-01 | 97.8% | 81.4% |
| 5083569 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 54.0 | 4.59e-01 | 95.7% | 61.3% |
| 4093737 | 2492.1.1.5 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › AICARFT_IMPCHas | 0.65 | 51.0 | 3.54e-01 | 95.7% | 25.4% |
| 5018457 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 50.0 | 4.48e-01 | 97.8% | 58.6% |
| 3885397 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.65 | 52.0 | 3.92e-01 | 100.0% | 33.8% |
| 5058928 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 54.0 | 3.30e-01 | 100.0% | 15.1% |
| 5035000 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.65 | 52.0 | 4.08e-01 | 100.0% | 41.0% |
| 4972385 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 48.0 | 4.23e-01 | 95.7% | 53.3% |
| 3673008 | 73.1.1.1 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA | 0.64 | 54.0 | 4.31e-01 | 97.8% | 87.4% |
| 5036532 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 52.0 | 3.96e-01 | 100.0% | 41.6% |
| 5034925 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.63 | 51.0 | 4.18e-01 | 100.0% | 55.0% |
| 3271393 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.63 | 51.0 | 3.92e-01 | 95.7% | 38.3% |
| 3274071 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.63 | 49.0 | 4.00e-01 | 97.8% | 43.0% |
| 4955497 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 51.0 | 4.06e-01 | 100.0% | 48.2% |
| 5062356 | 2492.1.1.5 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › AICARFT_IMPCHas | 0.63 | 48.0 | 3.26e-01 | 95.7% | 44.2% |
| 3808328 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.62 | 43.0 | 3.31e-01 | 78.3% | 78.4% |
| 3834262 | 223.2.1.15 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Longin | 0.62 | 43.0 | 3.16e-01 | 76.1% | 65.7% |
| 3974805 | 2498.1.1.71 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Aminopep | 0.62 | 50.0 | 3.08e-01 | 100.0% | 35.7% |
| 3786386 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 50.0 | 4.09e-01 | 95.7% | 65.3% |
| 5068205 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 51.0 | 4.17e-01 | 100.0% | 49.5% |
| 5053720 | 2492.1.1.5 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › AICARFT_IMPCHas | 0.61 | 47.0 | 3.33e-01 | 95.7% | 26.7% |
| 5079540 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 50.0 | 4.00e-01 | 100.0% | 47.6% |
| 1822735 | 11.1.1.102 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › A2M_BRD | 0.61 | 50.0 | 4.02e-01 | 97.8% | 49.5% |
| 5041113 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.60 | 49.0 | 4.10e-01 | 100.0% | 52.2% |
| 3273772 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 47.0 | 4.13e-01 | 100.0% | 64.6% |
| 5010852 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 46.0 | 3.78e-01 | 97.8% | 51.0% |
| 3739999 | 11.1.1.646 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TRP_N | 0.58 | 45.0 | 3.39e-01 | 100.0% | 50.7% |
| 3593642 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.58 | 44.0 | 3.71e-01 | 100.0% | 45.3% |
| 3726357 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 46.0 | 3.83e-01 | 97.8% | 56.8% |
| 3897315 | 382.1.1.2 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Toxin_TOLIP | 0.57 | 47.0 | 4.07e-01 | 100.0% | 58.7% |
| 3604585 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 45.0 | 3.68e-01 | 100.0% | 44.8% |
| None | — | 0.56 | 43.0 | 2.92e-01 | 100.0% | 23.0% | |
| 3193395 | 11.1.1.646 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TRP_N | 0.56 | 45.0 | 3.32e-01 | 100.0% | 52.4% |
| 3510118 | 4076.1.1.0 ↗ | a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like | 0.54 | 45.0 | 4.28e-01 | 97.8% | 83.6% |
| 4021799 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 40.0 | 2.96e-01 | 95.7% | 53.3% |
| 5084067 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.52 | 40.0 | 3.40e-01 | 97.8% | 49.5% |