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RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single.1__X__X__00522
Bact-VirRifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single.1__X__X__00522
Identity
- Kingdom:
- phage
Quality
81.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 35-154
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3nmzD00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.65 | 36.0 | 4.23e-01 | 100.0% | 77.4% |
| 2eczA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 32.0 | 4.08e-01 | 97.5% | 82.9% |
| 3f6zB01 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.55 | 35.0 | 4.16e-01 | 84.2% | 98.7% |
| 4wsiA02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 30.0 | 3.78e-01 | 71.7% | 100.0% |
| 3h6qA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.52 | 42.0 | 3.78e-01 | 86.7% | 98.2% |
| 2cofA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 33.0 | 3.48e-01 | 97.5% | 71.0% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3475429 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 38.0 | 4.92e-01 | 97.5% | 98.6% |
| 4038705 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.65 | 34.0 | 4.41e-01 | 88.3% | 92.3% |
| 3695780 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.64 | 33.0 | 3.91e-01 | 96.7% | 72.5% |
| 3234947 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.63 | 32.0 | 4.12e-01 | 94.2% | 87.7% |
| 3557677 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.63 | 34.0 | 4.33e-01 | 96.7% | 90.0% |
| 3918767 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.63 | 33.0 | 3.82e-01 | 96.7% | 70.6% |
| 3936225 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 31.0 | 3.86e-01 | 92.5% | 80.0% |
| 3989307 | 220.1.1.88 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF956 | 0.56 | 33.0 | 3.42e-01 | 89.2% | 61.8% |
| 3893746 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.52 | 34.0 | 3.31e-01 | 98.3% | 56.4% |
| 3929257 | 220.4.1.0 ↗ | beta barrels › PH domain-like › second barrel domain in viral glycoproteins › second barrel domain in viral glycoproteins | 0.51 | 33.0 | 3.87e-01 | 88.3% | 100.0% |