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RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single.1__X__X__00541
Bact-VirRifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single.1__X__X__00541
Identity
- Kingdom:
- phage
Quality
81.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 15-94
Domain cluster:
representative
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 42.0 | 4.61e-01 | 100.0% | 70.8% |
| 2dmoA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.72 | 47.0 | 5.03e-01 | 100.0% | 77.9% |
| 4fssB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 46.0 | 5.18e-01 | 100.0% | 91.8% |
| 6ghmC02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.67 | 45.0 | 5.01e-01 | 100.0% | 87.5% |
| 1wgsA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 43.0 | 3.63e-01 | 100.0% | 39.1% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 41.0 | 4.59e-01 | 100.0% | 82.3% |
| 2kxcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.65 | 45.0 | 4.86e-01 | 100.0% | 85.1% |
| 2v1rA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.64 | 46.0 | 4.99e-01 | 100.0% | 89.6% |
| 2ke9A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 45.0 | 4.93e-01 | 100.0% | 89.6% |
| 5kcoA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 36.0 | 3.97e-01 | 100.0% | 78.0% |
| 2f5kA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 36.0 | 4.21e-01 | 100.0% | 96.0% |
| 2ra2B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 34.0 | 3.77e-01 | 100.0% | 75.9% |
| 3pieC09 | 2.30.30.750 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 43.0 | 4.07e-01 | 100.0% | 64.6% |
| 2l3rA02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 39.0 | 4.12e-01 | 100.0% | 79.5% |
| 3be3A00 | 2.30.30.320 | Mainly Beta › Roll › SH3 type barrels. › DUF1653-like domain | 0.57 | 36.0 | 3.74e-01 | 100.0% | 67.1% |
| 1whmA01 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.56 | 44.0 | 4.65e-01 | 100.0% | 97.2% |
| 2f5tX02 | 2.30.30.690 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 40.0 | 3.93e-01 | 100.0% | 68.9% |
| 4oelB00 | 2.40.50.170 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Cysteine proteinases. Chain C | 0.55 | 36.0 | 3.80e-01 | 93.8% | 75.4% |
| 1ixdA00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.55 | 43.0 | 3.99e-01 | 100.0% | 67.3% |
| 4b6mB00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.54 | 41.0 | 4.21e-01 | 100.0% | 83.5% |
| 1khiA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 37.0 | 3.80e-01 | 100.0% | 74.7% |
| 3g1jA00 | 2.30.30.350 | Mainly Beta › Roll › SH3 type barrels. › mobile metagenome of vibrio cholerae. Integron cassette protein vch_cass4. | 0.54 | 44.0 | 4.25e-01 | 100.0% | 78.9% |
| 1jqpA02 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.53 | 45.0 | 3.27e-01 | 100.0% | 33.8% |
| 6e55A01 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.52 | 39.0 | 4.07e-01 | 100.0% | 87.8% |
| 4fwwA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 42.0 | 2.62e-01 | 88.7% | 31.3% |
| 1rl2A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 33.0 | 3.76e-01 | 92.5% | 91.1% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4942163 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 43.0 | 4.77e-01 | 100.0% | 70.8% |
| 5022848 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 44.0 | 5.07e-01 | 100.0% | 81.7% |
| 5069062 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.73 | 44.0 | 4.99e-01 | 100.0% | 81.4% |
| 3263489 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 48.0 | 5.26e-01 | 100.0% | 83.1% |
| 2527304 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.72 | 45.0 | 5.13e-01 | 100.0% | 83.6% |
| 4001172 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.70 | 47.0 | 5.05e-01 | 100.0% | 80.0% |
| 3888226 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.68 | 47.0 | 4.82e-01 | 100.0% | 74.7% |
| 3768116 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.68 | 43.0 | 3.14e-01 | 100.0% | 24.2% |
| 3553413 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.68 | 43.0 | 4.28e-01 | 100.0% | 61.2% |
| 5055039 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.68 | 46.0 | 3.82e-01 | 100.0% | 40.7% |
| 3742938 | 4.1.1.102 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_3 | 0.68 | 42.0 | 4.64e-01 | 100.0% | 78.5% |
| 3172122 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.67 | 47.0 | 5.30e-01 | 100.0% | 96.7% |
| 3622139 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.66 | 39.0 | 3.79e-01 | 100.0% | 52.2% |
| 3527248 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.66 | 45.0 | 4.78e-01 | 100.0% | 80.0% |
| 4105348 | 4.1.1.394 ↗ | beta barrels › SH3 › SH3 › SH3 › SlpA | 0.66 | 49.0 | 5.39e-01 | 100.0% | 98.4% |
| 1117666 | 4.1.1.103 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_12 | 0.65 | 50.0 | 4.89e-01 | 100.0% | 75.3% |
| 4093354 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.64 | 47.0 | 4.96e-01 | 100.0% | 87.1% |
| 3591144 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.63 | 44.0 | 3.49e-01 | 100.0% | 38.0% |
| 4207556 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.63 | 49.0 | 5.15e-01 | 100.0% | 94.3% |
| 4675879 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.59 | 43.0 | 3.00e-01 | 100.0% | 23.4% |
| 4029263 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.58 | 45.0 | 3.91e-01 | 100.0% | 55.0% |
| 3700744 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 53.0 | 4.89e-01 | 100.0% | 94.0% |
| 3598494 | 219.1.1.4 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C2 | 0.57 | 50.0 | 3.31e-01 | 100.0% | 31.0% |
| 3700860 | 219.1.1.4 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C2 | 0.57 | 49.0 | 3.26e-01 | 100.0% | 32.3% |
| 3888395 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.56 | 44.0 | 4.40e-01 | 100.0% | 82.1% |
| 3277860 | 4.1.1.368 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3097_N | 0.56 | 37.0 | 4.08e-01 | 100.0% | 84.6% |
| 3699364 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.55 | 42.0 | 4.38e-01 | 100.0% | 88.0% |
| 572 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.55 | 43.0 | 3.99e-01 | 100.0% | 67.3% |
| 3791777 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.54 | 41.0 | 4.05e-01 | 100.0% | 78.8% |
| 3926950 | 4.1.1.214 ↗ | beta barrels › SH3 › SH3 › SH3 › GCN5L1 | 0.54 | 43.0 | 3.74e-01 | 97.5% | 56.7% |
| 3501834 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 44.0 | 4.30e-01 | 100.0% | 81.2% |
| 3344303 | 4.1.1.85 ↗ | beta barrels › SH3 › SH3 › SH3 › MTR4_beta-barrel | 0.53 | 45.0 | 4.14e-01 | 100.0% | 72.0% |
| 4055974 | 4.1.1.248 ↗ | beta barrels › SH3 › SH3 › SH3 › CABIT | 0.52 | 37.0 | 3.27e-01 | 100.0% | 48.8% |
| 3495220 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.50 | 42.0 | 3.31e-01 | 100.0% | 45.0% |
D2
medium
residues 97-132
Domain cluster:
representative
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yzmA00 | 4.10.860.20 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain | 0.97 | 89.0 | 8.09e-01 | 100.0% | 78.3% |
| 1z0jB00 | 4.10.860.20 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain | 0.97 | 88.0 | 7.73e-01 | 100.0% | 70.6% |
| 2yxyA01 | 1.10.287.880 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Hypothetical protein YfhH domain | 0.96 | 87.0 | 7.69e-01 | 100.0% | 72.0% |
| 3r2kA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.95 | 86.0 | 5.49e-01 | 100.0% | 23.4% |
| 3unoE00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.94 | 84.0 | 5.27e-01 | 100.0% | 21.6% |
| 1s3qG00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.94 | 84.0 | 5.30e-01 | 100.0% | 22.1% |
| 4b6xA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.94 | 83.0 | 6.64e-01 | 100.0% | 52.2% |
| 2gs4A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.94 | 84.0 | 5.31e-01 | 100.0% | 22.8% |
| 1hr5A00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.93 | 83.0 | 7.55e-01 | 100.0% | 89.6% |
| 3k59A06 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.93 | 82.0 | 7.46e-01 | 97.2% | 74.5% |
| 5djsA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.92 | 80.0 | 5.19e-01 | 97.2% | 24.5% |
| 2zj2A04 | 1.10.3380.20 | Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › | 0.91 | 79.0 | 5.01e-01 | 100.0% | 21.6% |
| 2fjcB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.91 | 79.0 | 5.09e-01 | 100.0% | 23.1% |
| 4hb1A00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.90 | 74.0 | 6.93e-01 | 100.0% | 75.0% |
| 2gz6A00 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.90 | 76.0 | 4.30e-01 | 97.2% | 9.4% |
| 1bgfA00 | 1.10.532.10 | Mainly Alpha › Orthogonal Bundle › Transcription Factor, Stat-4 › STAT transcription factor, N-terminal domain | 0.90 | 77.0 | 5.28e-01 | 100.0% | 29.0% |
| 3kwoA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.90 | 78.0 | 5.09e-01 | 100.0% | 24.2% |
| 3zn3A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.90 | 80.0 | 4.72e-01 | 100.0% | 14.6% |
| 3craB01 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.89 | 77.0 | 5.81e-01 | 100.0% | 41.9% |
| 1j5wA02 | 1.20.58.180 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Class II aaRS and biotin synthetases; domain 2 | 0.89 | 78.0 | 6.03e-01 | 100.0% | 46.8% |
| 3q15B00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.88 | 76.0 | 4.34e-01 | 100.0% | 10.8% |
| 2ra1A03 | 1.20.58.770 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.88 | 75.0 | 6.28e-01 | 100.0% | 57.1% |
| 3iq1B00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.88 | 75.0 | 4.86e-01 | 100.0% | 22.6% |
| 1kfdA02 | 1.20.1060.10 | Mainly Alpha › Up-down Bundle › Taq DNA Polymerase; Chain T, domain 4 › Taq DNA Polymerase; Chain T, domain 4 | 0.87 | 74.0 | 5.99e-01 | 100.0% | 66.2% |
| 6fdpA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.87 | 71.0 | 4.94e-01 | 97.2% | 29.2% |
| 1d2mA03 | 6.10.140.240 | Special › Helix non-globular › Helix Hairpins › | 0.86 | 74.0 | 6.11e-01 | 100.0% | 56.1% |
| 6he1B01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.85 | 75.0 | 6.19e-01 | 100.0% | 56.2% |
| 4gyoB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.85 | 71.0 | 4.79e-01 | 100.0% | 25.9% |
| 3a98A02 | 1.20.1270.350 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Dedicator of cytokinesis N-terminal subdomain | 0.85 | 70.0 | 5.40e-01 | 100.0% | 41.4% |
| 1e52A00 | 4.10.860.10 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain | 0.84 | 71.0 | 6.24e-01 | 100.0% | 64.3% |
| 2xzmO02 | 1.10.287.10 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding | 0.82 | 70.0 | 5.65e-01 | 100.0% | 62.9% |
| 3kflA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.82 | 67.0 | 4.31e-01 | 100.0% | 20.6% |
| 3b2eF00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.80 | 68.0 | 5.76e-01 | 100.0% | 58.1% |
| 2gscC00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.78 | 68.0 | 4.79e-01 | 100.0% | 91.8% |
| 1gp8A00 | 4.10.810.10 | Few Secondary Structures › Irregular › Virus Scaffolding Protein; Chain A › Virus Scaffolding Protein; Chain A | 0.76 | 61.0 | 6.04e-01 | 100.0% | 90.0% |
| 4g09A03 | 1.20.5.1300 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.75 | 63.0 | 5.57e-01 | 97.2% | 87.3% |
| 5b1aC01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.75 | 61.0 | 5.15e-01 | 100.0% | 58.8% |
| 1cpyA02 | 1.10.287.410 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.68 | 52.0 | 4.46e-01 | 100.0% | 50.0% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5029773 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.99 | 91.0 | 6.97e-01 | 100.0% | 48.6% |
| 3310874 | 192.17.1.0 ↗ | alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like | 0.98 | 88.0 | 8.45e-01 | 97.2% | 87.5% |
| 3999236 | 622.1.1.1 ↗ | alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › HSCB_C | 0.97 | 90.0 | 6.19e-01 | 100.0% | 34.3% |
| 3240245 | 192.17.1.1 ↗ | alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like › Rbsn | 0.97 | 89.0 | 7.87e-01 | 100.0% | 72.0% |
| 3999931 | 192.17.1.1 ↗ | alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like › Rbsn | 0.97 | 89.0 | 7.10e-01 | 100.0% | 55.4% |
| 4324075 | 192.11.1.1 ↗ | alpha bundles › Long alpha-hairpin › C-terminal UvrC-binding domain of UvrB › C-terminal UvrC-binding domain of UvrB › UVR | 0.97 | 88.0 | 7.90e-01 | 100.0% | 75.0% |
| 3615661 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.96 | 88.0 | 4.80e-01 | 100.0% | 8.0% |
| 4618805 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.95 | 86.0 | 7.37e-01 | 100.0% | 90.9% |
| 4419795 | 192.11.1.1 ↗ | alpha bundles › Long alpha-hairpin › C-terminal UvrC-binding domain of UvrB › C-terminal UvrC-binding domain of UvrB › UVR | 0.95 | 85.0 | 8.19e-01 | 100.0% | 90.0% |
| 4432094 | 192.11.1.1 ↗ | alpha bundles › Long alpha-hairpin › C-terminal UvrC-binding domain of UvrB › C-terminal UvrC-binding domain of UvrB › UVR | 0.94 | 84.0 | 7.64e-01 | 100.0% | 75.0% |
| None | — | 0.93 | 83.0 | 4.51e-01 | 100.0% | 7.0% | |
| 4642864 | 192.11.1.1 ↗ | alpha bundles › Long alpha-hairpin › C-terminal UvrC-binding domain of UvrB › C-terminal UvrC-binding domain of UvrB › UVR | 0.93 | 83.0 | 7.40e-01 | 100.0% | 72.0% |
| 3441654 | 109.3.1.163 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_4, Ank_5 | 0.93 | 83.0 | 4.69e-01 | 100.0% | 10.1% |
| 3419469 | 3444.2.1.0 ↗ | alpha arrays › DP domain › XPC-binding domain and DDI helical domain › XPC-binding domain | 0.91 | 80.0 | 6.93e-01 | 100.0% | 65.5% |
| 4591721 | 2004.1.1.189 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_16 | 0.91 | 80.0 | 4.69e-01 | 100.0% | 13.3% |
| 3787065 | 109.4.1.381 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Rrn11 | 0.90 | 77.0 | 4.64e-01 | 97.2% | 15.2% |
| 4472442 | 192.11.1.1 ↗ | alpha bundles › Long alpha-hairpin › C-terminal UvrC-binding domain of UvrB › C-terminal UvrC-binding domain of UvrB › UVR | 0.89 | 76.0 | 7.36e-01 | 97.2% | 87.5% |
| 4867087 | 192.3.1.1 ↗ | alpha bundles › Long alpha-hairpin › Fe,Mn superoxide dismutase (SOD), N-terminal domain › Fe,Mn superoxide dismutase (SOD), N-terminal domain › Sod_Fe_N | 0.89 | 77.0 | 5.86e-01 | 100.0% | 43.4% |
| 3328312 | 192.17.1.0 ↗ | alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like | 0.88 | 75.0 | 7.07e-01 | 100.0% | 80.0% |