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RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single.1__X__X__00661
Bact-VirRifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single.1__X__X__00661
Identity
- Kingdom:
- phage
Quality
81.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 86-217
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2w4eA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.85 | 73.0 | 7.28e-01 | 100.0% | 86.1% |
| 1vhzA01 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.82 | 75.0 | 6.67e-01 | 100.0% | 70.8% |
| 4nfwF00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.82 | 73.0 | 6.90e-01 | 100.0% | 80.4% |
| 3q91B00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.81 | 69.0 | 7.01e-01 | 100.0% | 90.1% |
| 5c7qB00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.80 | 75.0 | 6.70e-01 | 100.0% | 73.9% |
| 1v8wA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.79 | 70.0 | 6.58e-01 | 100.0% | 79.9% |
| 3hhjB00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.78 | 67.0 | 6.79e-01 | 100.0% | 92.4% |
| 3bm4A00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.78 | 72.0 | 6.23e-01 | 99.2% | 71.6% |
| 2fmlA02 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.77 | 72.0 | 6.65e-01 | 100.0% | 92.1% |
| 3sonA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.76 | 69.0 | 6.69e-01 | 100.0% | 87.7% |
| 3qsjA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.76 | 70.0 | 5.82e-01 | 100.0% | 93.2% |
| 3dupB01 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.75 | 69.0 | 6.25e-01 | 99.2% | 77.3% |
| 3n77A00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.72 | 66.0 | 6.52e-01 | 99.2% | 92.2% |
| 3fjyA01 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.71 | 67.0 | 6.22e-01 | 100.0% | 90.6% |
| 1ryaA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.70 | 65.0 | 6.07e-01 | 100.0% | 85.0% |
| 1xkzC00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.50 | 39.0 | 3.25e-01 | 84.8% | 80.2% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3908864 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.85 | 80.0 | 6.91e-01 | 100.0% | 73.7% |
| 3494310 | 221.4.1.0 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix | 0.84 | 80.0 | 7.03e-01 | 100.0% | 82.1% |
| 3580121 | 221.4.1.0 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix | 0.84 | 80.0 | 6.74e-01 | 100.0% | 78.5% |
| 4963253 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.84 | 78.0 | 6.93e-01 | 100.0% | 72.5% |
| 3839072 | 221.4.1.0 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix | 0.84 | 79.0 | 6.64e-01 | 100.0% | 71.0% |
| 3357370 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.84 | 79.0 | 6.20e-01 | 100.0% | 57.6% |
| 3410697 | 221.4.1.0 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix | 0.82 | 78.0 | 6.59e-01 | 100.0% | 77.6% |
| 3517277 | 221.4.1.0 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix | 0.81 | 68.0 | 6.67e-01 | 86.4% | 87.0% |
| 3589504 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.80 | 75.0 | 6.65e-01 | 100.0% | 72.8% |
| 4956149 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.80 | 73.0 | 7.00e-01 | 100.0% | 86.0% |
| 4995185 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.79 | 62.0 | 6.33e-01 | 100.0% | 83.1% |
| 3280317 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.79 | 70.0 | 6.75e-01 | 100.0% | 84.8% |
| 3216248 | 221.4.1.0 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix | 0.79 | 75.0 | 5.09e-01 | 100.0% | 32.2% |
| 3261242 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.79 | 73.0 | 6.34e-01 | 97.7% | 71.6% |
| 3968000 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.78 | 70.0 | 6.96e-01 | 100.0% | 92.6% |
| 3886741 | 221.4.1.9 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX_4 | 0.78 | 70.0 | 6.69e-01 | 100.0% | 84.0% |
| 3594400 | 221.4.1.0 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix | 0.77 | 72.0 | 6.25e-01 | 100.0% | 92.3% |
| 3708370 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.77 | 72.0 | 6.29e-01 | 100.0% | 87.9% |
| 6256 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.77 | 72.0 | 6.16e-01 | 100.0% | 74.8% |
| 4025046 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.77 | 71.0 | 6.25e-01 | 100.0% | 72.1% |
| 5041586 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.77 | 68.0 | 6.72e-01 | 100.0% | 89.3% |
| 3741586 | 221.4.1.24 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX, DUF4743 | 0.76 | 71.0 | 5.39e-01 | 99.2% | 48.6% |
| 3271816 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.76 | 71.0 | 6.25e-01 | 100.0% | 88.6% |
| 3970070 | 221.4.1.0 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix | 0.76 | 65.0 | 6.44e-01 | 100.0% | 86.4% |
| 3214075 | 221.4.1.35 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX, PF30669 | 0.76 | 70.0 | 5.42e-01 | 100.0% | 64.6% |
| 3738254 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.76 | 70.0 | 6.12e-01 | 100.0% | 79.3% |
| 5038817 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.76 | 70.0 | 6.73e-01 | 100.0% | 93.3% |
| 3484055 | 221.4.1.0 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix | 0.75 | 70.0 | 5.80e-01 | 100.0% | 75.6% |
| 3510256 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.75 | 70.0 | 5.89e-01 | 100.0% | 76.3% |
| 3613249 | 221.4.1.0 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix | 0.75 | 69.0 | 5.34e-01 | 100.0% | 75.6% |
| 3937186 | 221.4.1.21 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › PF30669 | 0.75 | 70.0 | 5.29e-01 | 100.0% | 71.5% |
| 3967221 | 221.4.1.0 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix | 0.75 | 66.0 | 5.06e-01 | 93.9% | 71.4% |
| 3263069 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.74 | 69.0 | 5.94e-01 | 100.0% | 74.5% |
| 3944800 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.74 | 63.0 | 6.38e-01 | 98.5% | 92.3% |
| 3962429 | 221.4.1.0 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix | 0.73 | 54.0 | 5.68e-01 | 76.5% | 98.3% |
| 4962638 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.73 | 68.0 | 6.39e-01 | 100.0% | 87.1% |
| 4031749 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.70 | 58.0 | 6.00e-01 | 97.7% | 93.6% |
| 3925978 | 221.4.1.0 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix | 0.60 | 56.0 | 5.16e-01 | 100.0% | 91.5% |
| 3924518 | 221.4.1.0 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix | 0.54 | 41.0 | 4.45e-01 | 81.8% | 96.4% |
| 4887026 | 205.1.1.52 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_Nqo3, Fer4_NDSU1 | 0.51 | 23.0 | 2.86e-01 | 71.2% | 64.2% |