←Back to structures
RifSed_csp2_10ft_3_scaffold_6_prodigal-single.1__X__X__00045
Bact-VirRifSed_csp2_10ft_3_scaffold_6_prodigal-single.1__X__X__00045
Identity
- Kingdom:
- phage
Quality
77.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-69
Domain cluster:
representative
CATH (69)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kjwA00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.73 | 65.0 | 5.76e-01 | 100.0% | 77.1% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.73 | 65.0 | 4.83e-01 | 100.0% | 43.1% |
| 7agpA01 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.72 | 59.0 | 6.10e-01 | 100.0% | 98.4% |
| 2kl8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.72 | 62.0 | 5.82e-01 | 100.0% | 84.7% |
| 5ao2B02 | 3.30.70.2760 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.72 | 63.0 | 5.72e-01 | 98.5% | 96.6% |
| 2cveA02 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.71 | 58.0 | 5.88e-01 | 100.0% | 92.4% |
| 2anrA02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.71 | 59.0 | 5.72e-01 | 92.5% | 90.7% |
| 3aqoA01 | 3.30.70.3400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.71 | 62.0 | 5.93e-01 | 100.0% | 93.8% |
| 3dfeA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 59.0 | 5.58e-01 | 100.0% | 80.5% |
| 3onqA02 | 3.30.70.2730 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 59.0 | 5.64e-01 | 100.0% | 86.4% |
| 2f1fA02 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.68 | 55.0 | 5.29e-01 | 100.0% | 78.2% |
| 4rr5A02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.68 | 52.0 | 5.36e-01 | 100.0% | 89.1% |
| 1ndbA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.68 | 55.0 | 3.68e-01 | 91.0% | 73.2% |
| 2phcB01 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.68 | 56.0 | 5.26e-01 | 92.5% | 84.3% |
| 4ezeB00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.67 | 59.0 | 3.89e-01 | 100.0% | 24.6% |
| 4erdA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.67 | 58.0 | 5.06e-01 | 100.0% | 70.4% |
| 3cjsA00 | 3.30.70.1170 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 | 0.67 | 47.0 | 5.01e-01 | 100.0% | 86.2% |
| 6u9hF02 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.67 | 53.0 | 5.16e-01 | 100.0% | 77.9% |
| 4er8A00 | 3.30.70.1290 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transposase IS200-like | 0.67 | 57.0 | 4.37e-01 | 100.0% | 87.9% |
| 2l9dA00 | 3.30.70.2340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Uncharacterised protein PF12112 family, DUF3579 | 0.67 | 57.0 | 4.99e-01 | 100.0% | 77.8% |
| 5is2A01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.66 | 57.0 | 5.22e-01 | 100.0% | 82.4% |
| 2ewhA01 | 3.30.70.1710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain | 0.66 | 57.0 | 5.32e-01 | 100.0% | 81.2% |
| 1in0A01 | 3.30.70.860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 58.0 | 5.73e-01 | 100.0% | 97.1% |
| 4ae5C00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 58.0 | 4.42e-01 | 100.0% | 53.2% |
| 3jtnB00 | 3.30.70.1950 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 53.0 | 4.95e-01 | 100.0% | 72.2% |
| 4dezA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.64 | 56.0 | 4.98e-01 | 100.0% | 82.8% |
| 2qsrA01 | 3.90.1150.50 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription-repair-coupling factor, D7 domain | 0.64 | 52.0 | 4.02e-01 | 91.0% | 43.2% |
| 6n8eA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.64 | 51.0 | 3.91e-01 | 91.0% | 72.7% |
| 2f7aA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.64 | 51.0 | 4.22e-01 | 88.1% | 82.6% |
| 2kviA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.64 | 55.0 | 5.33e-01 | 100.0% | 89.6% |
| 1utaA00 | 3.30.70.1070 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat | 0.64 | 54.0 | 5.21e-01 | 100.0% | 84.4% |
| 5o5cB02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.63 | 52.0 | 4.26e-01 | 92.5% | 54.7% |
| 3p96A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.63 | 54.0 | 5.06e-01 | 100.0% | 96.4% |
| 1s7hA01 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 55.0 | 5.20e-01 | 100.0% | 83.7% |
| 4qjvA03 | 3.30.70.3110 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 49.0 | 5.03e-01 | 100.0% | 91.9% |
| 4annA00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.63 | 52.0 | 3.92e-01 | 95.5% | 63.1% |
| 3fezA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 54.0 | 4.11e-01 | 100.0% | 50.9% |
| 1lxnA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 54.0 | 4.85e-01 | 100.0% | 73.5% |
| 1s2oA02 | 3.90.1070.10 | Alpha Beta › Alpha-Beta Complex › Hypothetical Protein Ta0175; Chain: A, domain 2 › | 0.62 | 50.0 | 4.92e-01 | 94.0% | 85.9% |
| 2g0iA00 | 3.30.70.1490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp | 0.61 | 51.0 | 4.49e-01 | 100.0% | 86.5% |
| 1js3A03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.61 | 49.0 | 4.43e-01 | 92.5% | 69.1% |
| 6liuC02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.61 | 49.0 | 4.20e-01 | 92.5% | 62.9% |
| 5gaeG01 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.60 | 49.0 | 4.66e-01 | 92.5% | 90.1% |
| 1svvB02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.60 | 45.0 | 4.15e-01 | 92.5% | 60.9% |
| 7xinA03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.60 | 47.0 | 4.05e-01 | 88.1% | 65.1% |
| 2bf3B00 | 3.90.56.10 | Alpha Beta › Alpha-Beta Complex › Phenol Hydroxylase P2 Protein › Monooxygenase component MmoB/DmpM | 0.59 | 51.0 | 4.75e-01 | 100.0% | 81.8% |
| 4e1oA03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.59 | 48.0 | 4.30e-01 | 92.5% | 68.4% |
| 6k2eA01 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 46.0 | 4.64e-01 | 100.0% | 86.8% |
| 7k98E03 | 3.30.56.10 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › | 0.58 | 46.0 | 4.63e-01 | 91.0% | 94.1% |
| 2cxiA03 | 3.30.56.10 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › | 0.57 | 45.0 | 4.50e-01 | 89.6% | 88.6% |
| 3l44A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.56 | 46.0 | 3.43e-01 | 94.0% | 51.4% |
| 7vkcA01 | 1.10.1070.20 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › | 0.56 | 43.0 | 3.26e-01 | 83.6% | 77.6% |
| 1zcdA00 | 1.20.1530.10 | Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › Na+/H+ antiporter like domain | 0.56 | 44.0 | 2.84e-01 | 92.5% | 64.1% |
| 1s12A00 | 3.30.70.1490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp | 0.55 | 46.0 | 4.23e-01 | 100.0% | 87.2% |
| 8a5eD01 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 45.0 | 4.32e-01 | 98.5% | 92.4% |
| 5wzoA00 | 1.20.90.10 | Mainly Alpha › Up-down Bundle › Phospholipase A2 › Phospholipase A2 domain | 0.53 | 43.0 | 3.57e-01 | 92.5% | 79.7% |
| 3nwnA00 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.52 | 46.0 | 2.99e-01 | 100.0% | 68.5% |
| 2jhjA02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.52 | 39.0 | 3.37e-01 | 85.1% | 99.2% |
| 1x60A01 | 3.30.70.1070 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat | 0.52 | 44.0 | 4.40e-01 | 100.0% | 93.1% |
| 1pc6A00 | 1.10.3790.10 | Mainly Alpha › Orthogonal Bundle › NinB fold › NinB | 0.52 | 44.0 | 3.60e-01 | 100.0% | 61.0% |
| 3f0zA02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.52 | 39.0 | 3.28e-01 | 83.6% | 62.8% |
| 3thxB04 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.51 | 41.0 | 3.40e-01 | 91.0% | 58.6% |
| 4hv0C00 | 1.10.1220.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like | 0.51 | 40.0 | 3.77e-01 | 91.0% | 98.9% |
| 4qboA00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.51 | 39.0 | 3.56e-01 | 85.1% | 69.6% |
| 2o0bA01 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.51 | 44.0 | 3.18e-01 | 100.0% | 80.4% |
| 1sfxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 36.0 | 3.19e-01 | 77.6% | 57.7% |
| 1fokA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 36.0 | 3.35e-01 | 76.1% | 69.0% |
| 3nm6B00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.50 | 42.0 | 3.01e-01 | 98.5% | 31.4% |
| 3m4xA01 | 3.30.70.1170 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 | 0.50 | 36.0 | 3.44e-01 | 100.0% | 62.5% |
ECOD (87)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3772559 | 304.159.1.3 ↗ | a+b two layers › Alpha-beta plaits › Alpha-beta plait domain in NisB › Alpha-beta plait domain in NisB › KH_Vigilin | 0.79 | 72.0 | 5.71e-01 | 100.0% | 59.2% |
| 5044181 | 304.117.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC | 0.78 | 71.0 | 6.81e-01 | 100.0% | 90.7% |
| 3873803 | 327.11.2.27 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_Vigilin | 0.78 | 71.0 | 6.41e-01 | 100.0% | 85.6% |
| 4978228 | 305.2.1.0 ↗ | a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) | 0.77 | 66.0 | 6.75e-01 | 92.5% | 96.9% |
| 5059379 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.75 | 62.0 | 6.19e-01 | 100.0% | 88.6% |
| 5082818 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.74 | 61.0 | 6.03e-01 | 100.0% | 87.1% |
| 4029189 | 304.126.1.1 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C › V_ATPase_I | 0.74 | 66.0 | 6.27e-01 | 100.0% | 85.0% |
| 4951020 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.73 | 61.0 | 6.06e-01 | 100.0% | 88.6% |
| 4112187 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.73 | 60.0 | 5.95e-01 | 100.0% | 85.7% |
| 5036777 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.73 | 60.0 | 5.84e-01 | 100.0% | 81.3% |
| 4509594 | 304.28.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › Sec_GG | 0.73 | 65.0 | 6.02e-01 | 100.0% | 84.7% |
| 4930385 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.73 | 61.0 | 5.95e-01 | 100.0% | 84.0% |
| 4889884 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.73 | 64.0 | 4.77e-01 | 100.0% | 42.1% |
| 4999908 | 3501.1.1.0 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 | 0.73 | 61.0 | 6.19e-01 | 91.0% | 95.4% |
| 4779977 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.72 | 64.0 | 5.95e-01 | 100.0% | 84.7% |
| 5023279 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.72 | 55.0 | 5.80e-01 | 100.0% | 93.3% |
| 4778785 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.72 | 63.0 | 5.92e-01 | 100.0% | 86.7% |
| 4990535 | 305.2.1.2 ↗ | a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › DUF2067 | 0.71 | 59.0 | 5.99e-01 | 91.0% | 95.4% |
| 5043746 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.71 | 62.0 | 6.05e-01 | 100.0% | 89.3% |
| 4937597 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.70 | 56.0 | 5.86e-01 | 100.0% | 98.3% |
| 4142391 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.70 | 61.0 | 4.92e-01 | 100.0% | 65.9% |
| 5004123 | 3501.1.1.0 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 | 0.70 | 59.0 | 5.63e-01 | 92.5% | 79.5% |
| 4981719 | 3501.1.1.0 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 | 0.70 | 59.0 | 6.04e-01 | 92.5% | 95.4% |
| 5048300 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.70 | 62.0 | 5.35e-01 | 100.0% | 65.7% |
| 3240547 | 304.24.1.6 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › SBDS_C | 0.69 | 57.0 | 5.39e-01 | 100.0% | 77.5% |
| 4297402 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.69 | 61.0 | 3.90e-01 | 100.0% | 57.5% |
| 3330442 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.69 | 60.0 | 5.60e-01 | 100.0% | 80.0% |
| 5000281 | 304.55.2.0 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like | 0.69 | 59.0 | 5.54e-01 | 100.0% | 89.4% |
| 3596282 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.69 | 59.0 | 5.35e-01 | 98.5% | 100.0% |
| 3248261 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.69 | 60.0 | 5.92e-01 | 100.0% | 92.9% |
| 5036327 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.69 | 60.0 | 6.08e-01 | 97.0% | 100.0% |
| 5041711 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.68 | 56.0 | 5.57e-01 | 100.0% | 90.0% |
| 4032433 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.68 | 60.0 | 5.36e-01 | 100.0% | 76.8% |
| 4984434 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.68 | 58.0 | 5.87e-01 | 100.0% | 98.5% |
| 5055913 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.68 | 59.0 | 5.08e-01 | 100.0% | 65.5% |
| 3587799 | 4354.1.1.1 ↗ | a+b two layers › TRCF domain › TRCF domain › TRCF domain › TRCF | 0.68 | 55.0 | 4.24e-01 | 91.0% | 43.9% |
| 4959531 | 3501.1.1.0 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 | 0.67 | 56.0 | 5.71e-01 | 92.5% | 95.4% |
| 4958616 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.67 | 58.0 | 5.67e-01 | 100.0% | 89.3% |
| 3639594 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.66 | 51.0 | 5.29e-01 | 85.1% | 96.7% |
| 5011969 | 304.115.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in DAHP synthase › Ferredoxin-like domain in DAHP synthase | 0.66 | 51.0 | 5.32e-01 | 100.0% | 95.0% |
| 3988220 | 4354.1.1.1 ↗ | a+b two layers › TRCF domain › TRCF domain › TRCF domain › TRCF | 0.66 | 54.0 | 4.08e-01 | 91.0% | 40.9% |
| 4881297 | 304.8.1.1 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › Thr_dehydrat_C | 0.66 | 58.0 | 5.31e-01 | 100.0% | 79.5% |
| 4040528 | 304.24.1.16 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › PrmA | 0.66 | 56.0 | 5.19e-01 | 100.0% | 78.9% |
| 3477734 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.66 | 55.0 | 4.31e-01 | 100.0% | 41.9% |
| 3487937 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.66 | 50.0 | 5.19e-01 | 92.5% | 93.3% |
| 3581101 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.66 | 51.0 | 3.90e-01 | 88.1% | 48.8% |
| 5070538 | 3501.1.1.1 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 | 0.65 | 54.0 | 5.37e-01 | 92.5% | 91.4% |
| 4997522 | 304.12.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 | 0.65 | 55.0 | 5.29e-01 | 100.0% | 92.5% |
| 4976695 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.65 | 54.0 | 4.96e-01 | 100.0% | 71.1% |
| 3663293 | 304.12.1.10 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › ABCA12_C | 0.65 | 55.0 | 5.50e-01 | 100.0% | 97.1% |
| 3284992 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.65 | 52.0 | 4.82e-01 | 91.0% | 77.3% |
| 4995927 | 3715.1.1.0 ↗ | a+b two layers › Ribosomal protein L22e › Ribosomal protein L22e › Ribosomal protein L22e | 0.64 | 55.0 | 5.08e-01 | 100.0% | 85.6% |
| 4492390 | 304.4.1.56 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › PrmA | 0.64 | 54.0 | 5.13e-01 | 100.0% | 82.4% |
| 4681241 | 2003.1.5.55 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PrmA | 0.64 | 56.0 | 3.76e-01 | 100.0% | 26.7% |
| 3517748 | 1075.1.2.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain | 0.64 | 57.0 | 4.59e-01 | 100.0% | 62.3% |
| 4949239 | 3501.1.1.0 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 | 0.64 | 52.0 | 5.17e-01 | 92.5% | 87.1% |
| 1684874 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.64 | 54.0 | 5.11e-01 | 100.0% | 81.0% |
| 3386186 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.64 | 56.0 | 5.19e-01 | 100.0% | 84.7% |
| 5040618 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.63 | 54.0 | 4.96e-01 | 98.5% | 80.0% |
| 4593645 | 3501.1.1.0 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 | 0.63 | 51.0 | 5.05e-01 | 92.5% | 85.7% |
| 5008116 | 304.24.1.39 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › DUF790 | 0.63 | 52.0 | 4.81e-01 | 100.0% | 75.8% |
| 4139801 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.63 | 51.0 | 4.57e-01 | 91.0% | 94.7% |
| 4420323 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.62 | 51.0 | 4.69e-01 | 92.5% | 81.1% |
| 3966338 | 327.16.1.19 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › NRho | 0.62 | 47.0 | 5.01e-01 | 89.6% | 100.0% |
| 4979771 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.62 | 53.0 | 5.06e-01 | 100.0% | 85.0% |
| 3689135 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.62 | 55.0 | 5.02e-01 | 100.0% | 77.8% |
| 5066425 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.62 | 53.0 | 5.07e-01 | 100.0% | 83.7% |
| 4969157 | 4955.1.1.0 ↗ | a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.61 | 51.0 | 4.81e-01 | 91.0% | 81.2% |
| 3667031 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.61 | 49.0 | 4.84e-01 | 92.5% | 98.7% |
| 4603561 | 304.14.1.1 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR | 0.61 | 54.0 | 5.10e-01 | 100.0% | 85.0% |
| 3247481 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.61 | 46.0 | 4.84e-01 | 85.1% | 96.7% |
| 4928824 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.60 | 51.0 | 4.63e-01 | 100.0% | 80.0% |
| 3603288 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.60 | 50.0 | 5.01e-01 | 100.0% | 94.3% |
| 3912204 | 304.7.1.4 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › S8_pro-domain | 0.60 | 52.0 | 5.06e-01 | 100.0% | 92.0% |
| 4279367 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.59 | 48.0 | 4.61e-01 | 92.5% | 91.3% |
| 3943138 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.59 | 49.0 | 4.89e-01 | 98.5% | 97.1% |
| 4928783 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.59 | 47.0 | 4.84e-01 | 91.0% | 98.4% |
| 4070661 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.59 | 47.0 | 4.74e-01 | 89.6% | 100.0% |
| 3877590 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.58 | 46.0 | 4.48e-01 | 92.5% | 94.7% |
| 3408848 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.57 | 44.0 | 4.25e-01 | 85.1% | 74.7% |
| 3711102 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.57 | 40.0 | 3.60e-01 | 82.1% | 51.0% |
| 3976762 | 304.14.1.1 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR | 0.54 | 45.0 | 4.45e-01 | 100.0% | 90.7% |
| 4939413 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.54 | 37.0 | 4.00e-01 | 95.5% | 100.0% |
| 4944802 | 2008.1.1.15 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › HSDR_N | 0.52 | 41.0 | 2.85e-01 | 92.5% | 80.8% |
| 4012905 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.51 | 39.0 | 3.68e-01 | 88.1% | 72.9% |
| 4179803 | 4964.1.1.2 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol | 0.51 | 39.0 | 2.83e-01 | 85.1% | 30.5% |
| 4022896 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 37.0 | 2.80e-01 | 79.1% | 48.9% |