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RifSed_csp2_10ft_3_scaffold_6_prodigal-single.1__X__X__00257
Bact-VirRifSed_csp2_10ft_3_scaffold_6_prodigal-single.1__X__X__00257
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-167
Domain cluster:
rep: LacPavin_0818_WC40_scaffold_120392_prodigal-single.1__X__X__00156__D3-153
D2
high
residues 172-233_606-711
Domain cluster:
rep: MG752970.1__AVH85374.1__RsoM2USA_446__00446__D13-175
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00004.36 best | AAA | 57.5 | 2.80e-15 | 66.7% | 95.4% |
D3
high
residues 237-340_557-604
Domain cluster:
rep: SR-VP_0-2_scaffold_141_4556078_prodigal-single.1__X__X__00388__D99-198_300-332
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05203.22 best | Hom_end_hint | 63.9 | 3.20e-17 | 71.7% | 36.0% |
D4
high
residues 717-795
D5
medium
residues 366-546
Domain cluster:
rep: IMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015396__D229-404
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05204.20 best | Hom_end | 27.5 | 3.90e-06 | 55.2% | 76.4% |