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Ring_finger_protein
Euk-VirPandoravirus_macleodensis
Ring_finger_protein__YP_009480913__Pandoravirus_macleodensis__2107707
Identity
- Accession:
- YP_009480913 ↗
- Protein ID:
- Ring_finger_protein
- Kingdom:
- euk
Quality
48.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 335-436
Domain cluster:
representative
Pfam (5)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13639.13 best | zf-RING_2 | 54.2 | 1.90e-14 | 43.1% | 97.7% |
| PF13923.13 | zf-C3HC4_2 | 31.5 | 1.70e-07 | 41.2% | 97.5% |
| PF00097.32 | zf-C3HC4 | 28.3 | 1.80e-06 | 40.2% | 100.0% |
| PF13445.13 | zf-RING_UBOX | 26.9 | 5.20e-06 | 38.2% | 100.0% |
| PF17123.12 | zf-RING_11 | 46.3 | 3.70e-12 | 28.4% | 96.5% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4v3lC00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.91 | 59.0 | 7.32e-01 | 72.5% | 98.6% |
| 2l0bA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.84 | 60.0 | 6.38e-01 | 73.5% | 82.4% |
| 3vxvA00 | 3.30.890.10 | Alpha Beta › 2-Layer Sandwich › Methyl-cpg-binding Protein 2; Chain A › Methyl-cpg-binding Protein 2; Chain A | 0.53 | 30.0 | 3.61e-01 | 71.6% | 86.2% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3414941 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.95 | 67.0 | 7.46e-01 | 71.6% | 91.6% |
| 3819080 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.93 | 64.0 | 7.57e-01 | 70.6% | 97.3% |
| 3716109 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.93 | 65.0 | 6.63e-01 | 71.6% | 80.0% |
| 3314075 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.92 | 66.0 | 6.59e-01 | 73.5% | 98.1% |
| 3265424 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.91 | 63.0 | 7.37e-01 | 71.6% | 96.0% |
| 3496763 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.90 | 64.0 | 7.45e-01 | 72.5% | 98.7% |
| 3909802 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.90 | 63.0 | 6.46e-01 | 72.5% | 83.0% |
| 3468303 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.89 | 64.0 | 7.04e-01 | 73.5% | 95.3% |
| 3307860 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.89 | 64.0 | 7.25e-01 | 73.5% | 96.2% |
| 3331245 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.89 | 62.0 | 6.68e-01 | 71.6% | 97.8% |
| 3542887 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.88 | 63.0 | 7.24e-01 | 73.5% | 96.2% |
| 3446786 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.88 | 63.0 | 7.17e-01 | 73.5% | 93.8% |
| 3861234 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.88 | 62.0 | 6.82e-01 | 72.5% | 87.1% |
| 3328008 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.88 | 63.0 | 7.17e-01 | 73.5% | 98.7% |
| 3353437 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.87 | 58.0 | 7.02e-01 | 84.3% | 98.6% |
| 3704076 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.87 | 58.0 | 6.01e-01 | 71.6% | 72.6% |
| 3710947 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.87 | 60.0 | 6.46e-01 | 71.6% | 96.7% |
| 3743231 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.86 | 55.0 | 6.39e-01 | 70.6% | 88.0% |
| 3757891 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.86 | 60.0 | 5.63e-01 | 71.6% | 64.2% |
| 3240281 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.85 | 59.0 | 6.43e-01 | 70.6% | 87.1% |
| 3861410 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.85 | 59.0 | 5.87e-01 | 70.6% | 70.5% |
| 3306931 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.85 | 60.0 | 5.60e-01 | 71.6% | 64.2% |
| 3366410 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.85 | 61.0 | 5.84e-01 | 73.5% | 67.8% |
| 4028171 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.85 | 61.0 | 7.12e-01 | 73.5% | 100.0% |
| 3267159 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.84 | 62.0 | 6.35e-01 | 76.5% | 85.0% |
| 3647807 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.84 | 64.0 | 6.35e-01 | 78.4% | 85.7% |
| 3308002 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.84 | 59.0 | 6.61e-01 | 71.6% | 97.5% |
| 3371995 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.84 | 63.0 | 6.61e-01 | 78.4% | 93.7% |
| 3655538 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.83 | 57.0 | 6.24e-01 | 70.6% | 92.9% |
| 3528982 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.83 | 62.0 | 6.99e-01 | 76.5% | 100.0% |
| 3923649 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.82 | 61.0 | 5.72e-01 | 76.5% | 75.0% |
| 3669336 | 376.1.2.12 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › zf-RING_2 | 0.82 | 57.0 | 6.22e-01 | 71.6% | 90.6% |
| 3245553 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.81 | 57.0 | 6.05e-01 | 71.6% | 100.0% |
| 3724590 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.81 | 54.0 | 6.59e-01 | 72.5% | 100.0% |
| 3505351 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.79 | 57.0 | 6.60e-01 | 73.5% | 100.0% |
| 3489435 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.79 | 53.0 | 6.32e-01 | 75.5% | 100.0% |
| 3647459 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.79 | 54.0 | 6.38e-01 | 77.5% | 96.0% |
| 3487516 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.79 | 55.0 | 5.57e-01 | 71.6% | 97.0% |
| 3794548 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.76 | 58.0 | 5.66e-01 | 79.4% | 76.4% |
| 3808933 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.76 | 50.0 | 6.00e-01 | 70.6% | 98.6% |