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S16_GE16_scaffold_10741_prodigal-single.1__X__X__00050
Bact-VirS16_GE16_scaffold_10741_prodigal-single.1__X__X__00050
Identity
- Kingdom:
- phage
Quality
73.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-93
Domain cluster:
rep: IMGVR_UViG_3300018002_000020-3300018002-Ga0187868_10021255__D10-96
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01844.30 best | HNH | 22.6 | 1.30e-04 | 49.5% | 97.9% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7txnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 33.0 | 3.35e-01 | 74.2% | 47.8% |
| 2qgpA00 | 1.10.30.50 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › | 0.64 | 47.0 | 5.01e-01 | 79.6% | 86.7% |
| 4g6qA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 31.0 | 3.23e-01 | 75.3% | 58.6% |
| 3j7aZ00 | 3.30.1230.20 | Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › Ribosomal protein S21 | 0.54 | 38.0 | 4.16e-01 | 97.8% | 94.4% |
| 2xzmZ00 | 3.30.1230.20 | Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › Ribosomal protein S21 | 0.54 | 38.0 | 3.79e-01 | 97.8% | 70.1% |
| 2fd4A00 | 3.30.40.110 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › AvrPtoB, C-terminal domain | 0.53 | 38.0 | 3.66e-01 | 98.9% | 65.7% |
| 4esbA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 33.0 | 3.21e-01 | 74.2% | 56.3% |
| 2kskA00 | 3.30.30.10 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › Knottin, scorpion toxin-like | 0.51 | 28.0 | 3.16e-01 | 74.2% | 67.6% |
| 1fpqA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 32.0 | 2.87e-01 | 75.3% | 45.0% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3953524 | 378.1.1.23 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › DUF222 | 0.78 | 63.0 | 5.23e-01 | 84.9% | 51.6% |
| 3955812 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.73 | 58.0 | 5.88e-01 | 84.9% | 88.2% |
| 3210225 | 378.1.1.9 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_2 | 0.68 | 63.0 | 5.75e-01 | 100.0% | 90.0% |
| 3199415 | 378.1.1.9 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_2 | 0.67 | 61.0 | 4.52e-01 | 100.0% | 69.3% |
| 3685300 | 378.1.1.9 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_2 | 0.67 | 61.0 | 4.56e-01 | 100.0% | 74.5% |
| 4021854 | 378.1.1.9 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_2 | 0.65 | 58.0 | 4.68e-01 | 100.0% | 68.0% |
| 5071948 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 36.0 | 3.76e-01 | 74.2% | 60.0% |
| 3721920 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.63 | 56.0 | 3.98e-01 | 97.8% | 41.8% |
| 3208720 | 378.1.1.9 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_2 | 0.63 | 57.0 | 5.23e-01 | 100.0% | 92.6% |
| 5078667 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.62 | 34.0 | 3.17e-01 | 75.3% | 41.7% |
| 4958611 | 101.1.2.110 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_IclR | 0.62 | 34.0 | 2.73e-01 | 75.3% | 27.0% |
| 5058377 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.61 | 34.0 | 3.24e-01 | 75.3% | 45.5% |
| 4979041 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.61 | 34.0 | 2.84e-01 | 74.2% | 32.3% |
| 4956153 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.61 | 34.0 | 3.66e-01 | 75.3% | 62.5% |
| 3196868 | 378.1.1.9 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_2 | 0.61 | 51.0 | 4.52e-01 | 91.4% | 87.4% |
| 4843438 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.60 | 29.0 | 3.63e-01 | 75.3% | 78.4% |
| 4982703 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.60 | 33.0 | 3.40e-01 | 74.2% | 55.6% |
| 3243003 | 809.2.1.0 ↗ | a+b two layers › BLIP-like › BT0923-like › BT0923-like | 0.58 | 30.0 | 3.44e-01 | 79.6% | 67.7% |
| 1144783 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.57 | 50.0 | 4.24e-01 | 97.8% | 70.6% |
| 5014688 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.57 | 27.0 | 3.35e-01 | 83.9% | 72.7% |
| 5016171 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 32.0 | 2.65e-01 | 74.2% | 31.2% |
| 3930954 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.55 | 32.0 | 3.38e-01 | 75.3% | 62.4% |
| 4996031 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 39.0 | 4.09e-01 | 92.5% | 83.5% |
| 4926913 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.53 | 32.0 | 2.58e-01 | 75.3% | 31.4% |
| 3229165 | 3167.1.1.1 ↗ | a+b two layers › 40S ribosomal protein rpS21 (S21e) › 40S ribosomal protein rpS21 (S21e) › 40S ribosomal protein rpS21 (S21e) › Ribosomal_S21e | 0.53 | 37.0 | 3.83e-01 | 97.8% | 78.4% |
| 3944436 | 3240.1.1.1 ↗ | alpha arrays › Intramolecular chaperone domain in virus tail spike protein › Intramolecular chaperone domain in virus tail spike protein › Intramolecular chaperone domain in virus tail spike protein › Peptidase_S74 | 0.52 | 23.0 | 2.24e-01 | 72.0% | 30.0% |
| 3402911 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.52 | 36.0 | 4.16e-01 | 74.2% | 95.7% |
| 4503351 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.52 | 33.0 | 3.24e-01 | 75.3% | 57.1% |
| 142201 | 387.1.5.1 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like › Gamma-thionin | 0.51 | 28.0 | 3.16e-01 | 74.2% | 67.6% |
| 4963630 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.50 | 37.0 | 2.70e-01 | 78.5% | 98.6% |