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S16_GE16_scaffold_10741_prodigal-single.1__X__X__00073
Bact-VirS16_GE16_scaffold_10741_prodigal-single.1__X__X__00073
Identity
- Kingdom:
- phage
Quality
52.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 8-105
D2
medium
residues 106-247
Domain cluster:
rep: S2_005_003_R2_scaffold_7_prodigal-single.1__X__X__00146__D308-456
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7r0kA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.59 | 34.0 | 3.23e-01 | 99.3% | 47.6% |
| 2lwxA00 | 1.10.8.840 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ribosome-associated complex head domain | 0.59 | 31.0 | 3.76e-01 | 95.1% | 79.5% |
| 2yskA00 | 1.10.490.110 | Mainly Alpha › Orthogonal Bundle › Globin-like › Uncharacterized conserved protein DUF2267 | 0.57 | 42.0 | 4.26e-01 | 100.0% | 75.0% |
| 2x1dA02 | 1.10.10.2120 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.56 | 30.0 | 3.81e-01 | 93.0% | 94.6% |
| 1hbgA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.54 | 46.0 | 4.60e-01 | 91.5% | 98.0% |
| 2bk9A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.54 | 45.0 | 4.44e-01 | 90.1% | 93.5% |
| 1jwnA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.54 | 46.0 | 4.57e-01 | 92.3% | 96.6% |
| 2c0kB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.53 | 45.0 | 4.46e-01 | 90.8% | 96.6% |
| 1cg5B00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.53 | 45.0 | 4.53e-01 | 92.3% | 97.2% |
| 1exaA00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.53 | 42.0 | 3.56e-01 | 85.2% | 65.7% |
| 3gs3A00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.52 | 32.0 | 2.65e-01 | 71.8% | 33.7% |
| 2r40D00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.51 | 41.0 | 3.49e-01 | 85.2% | 67.4% |
| 3lcnB00 | 1.10.340.40 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Nuclear abundant poly(A) RNA-bind protein 2, N-terminal domain | 0.51 | 31.0 | 3.59e-01 | 100.0% | 86.6% |
| 3lqhA02 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.51 | 33.0 | 3.80e-01 | 75.4% | 88.7% |
| 1k74D00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.51 | 40.0 | 3.30e-01 | 85.2% | 57.4% |
| 3ubcA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.51 | 43.0 | 4.45e-01 | 90.8% | 99.2% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3632511 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.52 | 37.0 | 2.55e-01 | 97.9% | 19.8% |
| 2771599 | 592.3.1.1 ↗ | alpha arrays › PWI domain-like › N-terminal domain of egg case silk protein TuSp1 › N-terminal domain of egg case silk protein TuSp1 › Spidroin_N | 0.50 | 38.0 | 3.90e-01 | 80.3% | 94.1% |