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S16_GE16_scaffold_10741_prodigal-single.1__X__X__00080
Bact-VirS16_GE16_scaffold_10741_prodigal-single.1__X__X__00080
Identity
- Kingdom:
- phage
Quality
68.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 156-391
Domain cluster:
representative
D2
high
residues 404-450
D3
medium
residues 1-102
D4
medium
residues 108-152
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3pqhA01 | 2.20.220.20 | Mainly Beta › Single Sheet › Glycosyl hydrolase fold › | 0.84 | 66.0 | 5.99e-01 | 100.0% | 65.0% |
| 4tkcA00 | 2.90.10.10 | Mainly Beta › Orthogonal Prism › Agglutinin, subunit A › Bulb-type lectin domain | 0.73 | 53.0 | 3.94e-01 | 80.0% | 62.7% |
| 4ld1A00 | 2.60.450.20 | Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › | 0.72 | 57.0 | 3.97e-01 | 100.0% | 25.5% |
| 4le7A01 | 2.90.10.30 | Mainly Beta › Orthogonal Prism › Agglutinin, subunit A › | 0.72 | 52.0 | 3.53e-01 | 80.0% | 22.1% |
| 4le7A02 | 2.90.10.10 | Mainly Beta › Orthogonal Prism › Agglutinin, subunit A › Bulb-type lectin domain | 0.69 | 49.0 | 4.04e-01 | 75.6% | 85.4% |
| 3mezD00 | 2.90.10.10 | Mainly Beta › Orthogonal Prism › Agglutinin, subunit A › Bulb-type lectin domain | 0.69 | 54.0 | 4.08e-01 | 88.9% | 54.5% |
| 6qk7A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.67 | 47.0 | 2.80e-01 | 73.3% | 10.4% |
| 3p34A02 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.65 | 53.0 | 4.23e-01 | 100.0% | 43.3% |
| 2m3xC02 | 2.40.10.360 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.65 | 44.0 | 3.96e-01 | 73.3% | 47.8% |
| 3m2tA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.65 | 54.0 | 3.82e-01 | 100.0% | 84.2% |
| 4g7nA02 | 3.30.1120.130 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.64 | 48.0 | 3.92e-01 | 100.0% | 41.2% |
| 1a48A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.63 | 46.0 | 3.51e-01 | 80.0% | 86.5% |
| 4nkbB02 | 3.30.1120.130 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.62 | 49.0 | 4.08e-01 | 100.0% | 46.7% |
| 1flgA00 | 2.140.10.10 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Quinoprotein alcohol dehydrogenase-like superfamily | 0.61 | 45.0 | 2.57e-01 | 82.2% | 6.7% |
| 2kgyA00 | 3.30.505.20 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › | 0.59 | 47.0 | 3.96e-01 | 100.0% | 71.7% |
| 2fhxA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.59 | 49.0 | 3.15e-01 | 100.0% | 89.4% |
| 2ymsA00 | 2.40.128.630 | Mainly Beta › Beta Barrel › Lipocalin › | 0.57 | 46.0 | 3.48e-01 | 97.8% | 55.6% |
| 2m7oA00 | 3.10.450.400 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Uncharacterised protein PF15513, DUF4651 | 0.56 | 42.0 | 3.76e-01 | 88.9% | 55.7% |
| 3jtzA00 | 3.30.160.390 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Integrase, DNA-binding domain | 0.55 | 44.0 | 3.75e-01 | 93.3% | 53.2% |
| 2pagA00 | 3.40.1580.10 | Alpha Beta › 3-Layer(aba) Sandwich › SMI1/KNR4-like › SMI1/KNR4-like | 0.55 | 37.0 | 2.82e-01 | 73.3% | 25.0% |
| 1iv8A05 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.54 | 39.0 | 3.58e-01 | 82.2% | 95.5% |
| 4bbwA02 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.54 | 43.0 | 2.65e-01 | 100.0% | 42.9% |
| 2gu3A01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 43.0 | 3.86e-01 | 100.0% | 95.4% |
| 7ob9B01 | 3.90.1110.10 | Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 | 0.50 | 41.0 | 2.80e-01 | 100.0% | 30.2% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5003246 | 2.7.1.1 ↗ | beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N › Phage_base_V | 0.82 | 73.0 | 5.00e-01 | 100.0% | 32.0% |
| 4030652 | 77.3.1.0 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain | 0.74 | 58.0 | 4.02e-01 | 100.0% | 26.0% |
| 3717674 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.72 | 58.0 | 4.65e-01 | 100.0% | 44.4% |
| 3272708 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.70 | 55.0 | 4.61e-01 | 100.0% | 48.8% |
| 3285726 | 5.3.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II | 0.70 | 50.0 | 3.82e-01 | 77.8% | 34.3% |
| 3711004 | 77.3.1.1 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › Tcp10_C | 0.70 | 57.0 | 4.17e-01 | 100.0% | 32.8% |
| 3764875 | 77.3.1.1 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › Tcp10_C | 0.69 | 55.0 | 3.66e-01 | 100.0% | 21.1% |
| 4247302 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.69 | 56.0 | 4.51e-01 | 100.0% | 45.6% |
| 3619159 | 292.2.1.5 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › Polo_box_3 | 0.68 | 55.0 | 4.37e-01 | 100.0% | 43.2% |
| 4120507 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.68 | 56.0 | 4.42e-01 | 100.0% | 44.2% |
| 3599237 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.67 | 59.0 | 4.70e-01 | 100.0% | 53.3% |
| 3660003 | 5.1.10.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed › ANAPC4_WD40 | 0.67 | 47.0 | 3.91e-01 | 73.3% | 43.8% |
| 3741285 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.67 | 54.0 | 4.31e-01 | 100.0% | 44.2% |
| 3504473 | 77.3.1.0 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain | 0.66 | 52.0 | 3.55e-01 | 100.0% | 22.8% |
| 3187834 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.65 | 53.0 | 4.08e-01 | 100.0% | 50.8% |
| 4011286 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.65 | 53.0 | 3.81e-01 | 100.0% | 39.4% |
| 3499681 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.64 | 54.0 | 4.39e-01 | 100.0% | 53.8% |
| 3843785 | 292.2.1.10 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › C5orf34-like_N | 0.64 | 55.0 | 4.35e-01 | 100.0% | 51.0% |
| 4797891 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.63 | 51.0 | 4.50e-01 | 100.0% | 58.0% |
| 4797890 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.63 | 52.0 | 4.30e-01 | 100.0% | 49.4% |
| 3719952 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.63 | 46.0 | 4.21e-01 | 100.0% | 58.7% |
| 3884681 | 292.2.1.10 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › C5orf34-like_N | 0.62 | 52.0 | 4.24e-01 | 100.0% | 52.6% |
| 3884680 | 292.2.1.6 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › DUF4520 | 0.62 | 53.0 | 4.06e-01 | 100.0% | 58.2% |
| 3776456 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.59 | 44.0 | 3.66e-01 | 84.4% | 44.0% |
| 3774338 | 292.2.1.6 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › DUF4520 | 0.58 | 50.0 | 3.84e-01 | 100.0% | 50.9% |
| 4012652 | 4221.1.1.0 ↗ | a+b two layers › YkuJ-like › YkuJ-like › YkuJ-like | 0.55 | 46.0 | 4.14e-01 | 97.8% | 92.3% |
| 4990182 | 243.6.1.1 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › DUF1947 | 0.55 | 45.0 | 3.95e-01 | 100.0% | 92.0% |
| 3784858 | 5.1.4.362 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_VPS8 | 0.55 | 45.0 | 2.65e-01 | 100.0% | 16.3% |
| 3310018 | 5.1.10.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed › SSL_N | 0.55 | 38.0 | 2.97e-01 | 82.2% | 30.0% |
| 3988706 | 243.3.1.13 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF5590 | 0.53 | 45.0 | 3.96e-01 | 100.0% | 82.9% |
D5
medium
residues 498-519_537-637_651-661