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S16_GE16_scaffold_10741_prodigal-single.1__X__X__00139
Bact-VirS16_GE16_scaffold_10741_prodigal-single.1__X__X__00139
Identity
- Kingdom:
- phage
Quality
88.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 134-247
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3m7kA00 | 3.30.40.220 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.61 | 51.0 | 4.71e-01 | 88.6% | 71.8% |
| 1zm8A00 | 3.40.570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Extracellular Endonuclease; Chain A › Extracellular Endonuclease, subunit A | 0.60 | 42.0 | 3.28e-01 | 71.9% | 38.5% |
| 2qgpA00 | 1.10.30.50 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › | 0.58 | 37.0 | 4.27e-01 | 70.2% | 88.0% |
| 5inhA04 | 3.40.570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Extracellular Endonuclease; Chain A › Extracellular Endonuclease, subunit A | 0.55 | 44.0 | 3.30e-01 | 86.8% | 51.2% |
| 4mtnA01 | 3.30.1480.10 | Alpha Beta › 2-Layer Sandwich › N Utilization Substance Protein A; Chain:P; domain 4 › NusA, N-terminal domain | 0.51 | 31.0 | 3.32e-01 | 82.5% | 70.5% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3970110 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.69 | 47.0 | 3.93e-01 | 70.2% | 79.9% |
| 3601605 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.61 | 43.0 | 3.35e-01 | 72.8% | 40.9% |
| 4941657 | 377.1.1.88 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › HNH | 0.60 | 35.0 | 4.17e-01 | 82.5% | 86.7% |
| 3723363 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.59 | 43.0 | 4.75e-01 | 91.2% | 97.8% |
| 4949181 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.57 | 35.0 | 4.15e-01 | 77.2% | 92.0% |
| 2860134 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.55 | 45.0 | 3.28e-01 | 88.6% | 52.3% |
| 3561303 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.54 | 47.0 | 4.23e-01 | 97.4% | 68.5% |
| 5082962 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.53 | 42.0 | 4.34e-01 | 88.6% | 88.2% |
| 3733508 | 2003.1.3.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › NAD_binding_8 | 0.51 | 45.0 | 3.25e-01 | 99.1% | 89.0% |