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S16_GE16_scaffold_10741_prodigal-single.1__X__X__00172
Bact-VirS16_GE16_scaffold_10741_prodigal-single.1__X__X__00172
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-202
Domain cluster:
rep: SRR1747055_scaffold_2_prodigal-single.1__X__X__00298__D1-169
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00777.24 best | Glyco_transf_29 | 51.5 | 1.30e-13 | 41.5% | 19.9% |
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4js1A00 | 3.90.1480.20 | Alpha Beta › Alpha-Beta Complex › sialyltransferase cstii, chain A › Glycosyl transferase family 29 | 0.78 | 74.0 | 6.19e-01 | 99.0% | 79.2% |
| 2wmlA00 | 3.90.1480.20 | Alpha Beta › Alpha-Beta Complex › sialyltransferase cstii, chain A › Glycosyl transferase family 29 | 0.77 | 74.0 | 6.48e-01 | 100.0% | 98.6% |
| 5bo7B00 | 3.90.1480.20 | Alpha Beta › Alpha-Beta Complex › sialyltransferase cstii, chain A › Glycosyl transferase family 29 | 0.74 | 71.0 | 6.24e-01 | 100.0% | 93.2% |
| 3k94A00 | 3.40.50.10240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin pyrophosphokinase, catalytic domain | 0.72 | 46.0 | 4.49e-01 | 93.5% | 58.4% |
| 4fflA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 30.0 | 4.11e-01 | 94.5% | 98.9% |
| 3ip1A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 39.0 | 4.41e-01 | 90.5% | 92.0% |
| 3phhA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 34.0 | 4.15e-01 | 88.0% | 93.1% |
| 1vkzA01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 24.0 | 3.54e-01 | 82.5% | 96.1% |
| 2rjnA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 27.0 | 3.28e-01 | 70.5% | 67.4% |
| 3tjlA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 43.0 | 3.48e-01 | 81.0% | 88.9% |
| 1e3jA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 37.0 | 4.33e-01 | 90.5% | 97.8% |
| 3abiA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 32.0 | 3.47e-01 | 83.0% | 66.3% |
| 2g1uA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 33.0 | 3.87e-01 | 83.5% | 86.1% |
| 4gvlA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 33.0 | 3.89e-01 | 98.0% | 88.2% |
| 4zeoH02 | 3.40.50.10470 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor eif-2b; domain 2 | 0.53 | 40.0 | 4.40e-01 | 89.5% | 95.6% |
| 3o0hB02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 29.0 | 3.66e-01 | 80.0% | 92.3% |
| 2e67A00 | 3.20.20.370 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase | 0.51 | 45.0 | 4.13e-01 | 94.5% | 89.0% |
| 1pjqA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 29.0 | 3.72e-01 | 84.0% | 97.3% |
| 3h5iA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 27.0 | 3.34e-01 | 82.0% | 78.4% |
| 2v3aA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.50 | 32.0 | 3.73e-01 | 81.5% | 91.1% |
| 4lwoE01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 34.0 | 3.68e-01 | 90.5% | 83.1% |
| 2nxcA03 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 36.0 | 4.05e-01 | 90.5% | 96.1% |
| 2i5gA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.50 | 45.0 | 3.88e-01 | 99.0% | 84.9% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3921041 | 7555.1.1.1 ↗ | a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Glyco_transf_29 | 0.84 | 80.0 | 6.74e-01 | 99.5% | 92.3% |
| 3876385 | 7555.1.1.1 ↗ | a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Glyco_transf_29 | 0.83 | 79.0 | 6.52e-01 | 100.0% | 95.1% |
| 3862284 | 7555.1.1.1 ↗ | a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Glyco_transf_29 | 0.82 | 78.0 | 6.66e-01 | 100.0% | 85.3% |
| 3569432 | 7555.1.1.1 ↗ | a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Glyco_transf_29 | 0.81 | 77.0 | 6.92e-01 | 100.0% | 92.1% |
| 3756908 | 7555.1.1.1 ↗ | a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Glyco_transf_29 | 0.81 | 77.0 | 6.83e-01 | 99.5% | 87.8% |
| 3663063 | 7555.1.1.1 ↗ | a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Glyco_transf_29 | 0.81 | 77.0 | 6.29e-01 | 100.0% | 77.0% |
| 3776013 | 7555.1.1.1 ↗ | a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Glyco_transf_29 | 0.81 | 77.0 | 6.44e-01 | 100.0% | 80.3% |
| 3646512 | 7555.1.1.1 ↗ | a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Glyco_transf_29 | 0.80 | 77.0 | 6.64e-01 | 100.0% | 86.9% |
| 3529503 | 7555.1.1.1 ↗ | a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Glyco_transf_29 | 0.80 | 76.0 | 6.62e-01 | 100.0% | 93.1% |
| 3842996 | 7555.1.1.1 ↗ | a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Glyco_transf_29 | 0.79 | 76.0 | 6.33e-01 | 100.0% | 90.0% |
| 3910916 | 7555.1.1.1 ↗ | a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Glyco_transf_29 | 0.79 | 75.0 | 6.47e-01 | 100.0% | 90.5% |
| 4125699 | 7555.1.1.1 ↗ | a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Glyco_transf_29 | 0.79 | 75.0 | 6.50e-01 | 100.0% | 98.6% |
| 3393202 | 7555.1.1.1 ↗ | a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Glyco_transf_29 | 0.78 | 74.0 | 6.18e-01 | 99.5% | 80.3% |
| 3859536 | 7555.1.1.1 ↗ | a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Glyco_transf_29 | 0.78 | 74.0 | 6.17e-01 | 99.5% | 79.1% |
| 119283 | 7555.1.1.1 ↗ | a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Glyco_transf_29 | 0.77 | 74.0 | 6.48e-01 | 100.0% | 98.6% |
| 3348117 | 7555.1.1.1 ↗ | a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Glyco_transf_29 | 0.77 | 74.0 | 5.99e-01 | 100.0% | 68.2% |
| 3676460 | 7555.1.1.1 ↗ | a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Glyco_transf_29 | 0.76 | 72.0 | 6.17e-01 | 100.0% | 86.0% |
| 1567023 | 7555.1.1.1 ↗ | a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Glyco_transf_29 | 0.74 | 71.0 | 6.24e-01 | 100.0% | 93.2% |
| 3217659 | 7562.1.1.1 ↗ | a/b three-layered sandwiches › Thiamin pyrophosphokinase, catalytic domain › Thiamin pyrophosphokinase, catalytic domain › Thiamin pyrophosphokinase, catalytic domain › TPK_catalytic | 0.71 | 47.0 | 5.69e-01 | 94.0% | 98.5% |
| 3838380 | 7555.1.1.2 ↗ | a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › MptE-like | 0.65 | 61.0 | 5.37e-01 | 98.5% | 75.0% |
| 4978575 | 7555.1.1.2 ↗ | a/b three-layered sandwiches › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › Alpha-2,3/8-sialyltransferase CstII-related › MptE-like | 0.65 | 60.0 | 5.49e-01 | 98.0% | 76.9% |
| 4355891 | 2003.1.8.4 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › MurCD/PglD N-terminal domain-like › MurD-like_N | 0.59 | 27.0 | 3.65e-01 | 94.0% | 83.0% |
| 1505798 | 2003.1.8.4 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › MurCD/PglD N-terminal domain-like › MurD-like_N | 0.57 | 29.0 | 3.78e-01 | 94.5% | 92.9% |
| 1759039 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.54 | 30.0 | 3.36e-01 | 90.5% | 66.7% |
| 4680685 | 7543.1.1.1 ↗ | a/b three-layered sandwiches › Methylglyoxal synthase-like › Methylglyoxal synthase-like › Methylglyoxal synthase-like › AICARFT_IMPCHas,MGS | 0.54 | 37.0 | 3.68e-01 | 94.0% | 65.1% |
| 5007511 | 2004.1.1.103 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sua5_C | 0.52 | 26.0 | 3.49e-01 | 94.0% | 92.9% |