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S16_GE16_scaffold_10741_prodigal-single.1__X__X__00246
Bact-VirS16_GE16_scaffold_10741_prodigal-single.1__X__X__00246
Identity
- Kingdom:
- phage
Quality
82.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-137
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ijrA01 | 3.30.70.1270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Api92-like domains | 0.68 | 46.0 | 5.37e-01 | 74.6% | 96.9% |
| 4yjmC00 | 3.30.1390.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L30; Chain: A, › Ribosomal protein L7/L12, C-terminal domain/Adaptor protein ClpS | 0.65 | 39.0 | 4.78e-01 | 76.1% | 96.4% |
| 1itpA00 | 3.30.70.80 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 | 0.63 | 36.0 | 4.59e-01 | 76.1% | 97.4% |
| 2f1fA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.62 | 37.0 | 4.66e-01 | 76.9% | 100.0% |
| 3ibwA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.62 | 37.0 | 4.61e-01 | 77.6% | 98.7% |
| 3p96A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.60 | 38.0 | 4.53e-01 | 76.1% | 98.8% |
| 3c4bA02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.60 | 24.0 | 3.29e-01 | 94.0% | 71.6% |
| 1mwyA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 34.0 | 4.20e-01 | 77.6% | 100.0% |
| 2nyhA00 | 3.30.70.1240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › DOPA-like domains | 0.58 | 40.0 | 4.31e-01 | 70.9% | 85.3% |
| 3c19A01 | 3.30.70.1380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transcriptional regulatory protein pf0864 domain like | 0.56 | 36.0 | 4.09e-01 | 76.1% | 86.9% |
| 2cg8B02 | 3.30.70.560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK | 0.55 | 41.0 | 4.20e-01 | 77.6% | 92.4% |
| 6qm7J00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.54 | 41.0 | 3.54e-01 | 78.4% | 57.8% |
| 1rypK00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.54 | 41.0 | 3.56e-01 | 78.4% | 60.1% |
| 1s6lA02 | 3.15.10.60 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Alkylmercury lyase | 0.52 | 33.0 | 3.42e-01 | 79.9% | 67.4% |
| 7rd0A01 | 3.90.1310.10 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) | 0.51 | 40.0 | 3.82e-01 | 82.1% | 81.9% |
| 2cjkA02 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.51 | 31.0 | 3.78e-01 | 77.6% | 98.8% |
| 1iruI00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.51 | 38.0 | 3.26e-01 | 78.4% | 51.8% |
| 1gh8A00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.51 | 33.0 | 3.87e-01 | 75.4% | 97.8% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3953844 | 304.24.1.34 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › DUF3145 | 0.77 | 72.0 | 7.02e-01 | 100.0% | 91.7% |
| 3282845 | 304.8.1.26 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DUF3145 | 0.76 | 70.0 | 6.73e-01 | 99.3% | 92.0% |
| 1734768 | 4187.1.1.1 ↗ | a+b two layers › NosL/MerB-like › NosL/MerB-like › NosL/MerB-like › MerB | 0.72 | 33.0 | 4.82e-01 | 73.1% | 100.0% |
| 3512169 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.65 | 43.0 | 5.04e-01 | 77.6% | 98.9% |
| 4320117 | 308.1.1.2 ↗ | a+b two layers › ClpS-like › ClpS-related › ClpS-related › ClpS | 0.63 | 37.0 | 4.43e-01 | 76.1% | 88.6% |
| 5056500 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.62 | 39.0 | 4.71e-01 | 72.4% | 98.8% |
| 5017989 | 304.4.1.82 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › DUF3303 | 0.62 | 38.0 | 4.56e-01 | 75.4% | 92.2% |
| 4947384 | 304.8.1.7 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ALS_ss_C | 0.62 | 38.0 | 4.64e-01 | 78.4% | 97.6% |
| 4951256 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.61 | 38.0 | 4.58e-01 | 77.6% | 93.3% |
| 3164917 | 304.8.1.8 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_4 | 0.61 | 36.0 | 4.51e-01 | 77.6% | 98.8% |
| 3287506 | 304.8.1.22 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › AHAS-like_ACT | 0.60 | 37.0 | 4.32e-01 | 78.4% | 86.3% |
| 4067121 | 304.8.1.8 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_4 | 0.60 | 36.0 | 4.41e-01 | 77.6% | 94.1% |
| 5004030 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.60 | 39.0 | 4.50e-01 | 77.6% | 91.6% |
| 4974063 | 304.4.1.20 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg2 | 0.60 | 36.0 | 4.16e-01 | 76.9% | 83.2% |
| 4027199 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.60 | 36.0 | 4.25e-01 | 75.4% | 87.8% |
| 5045869 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.59 | 37.0 | 3.83e-01 | 76.1% | 65.6% |
| 5021042 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.59 | 36.0 | 4.31e-01 | 76.1% | 95.3% |
| 4311079 | 304.4.1.20 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg2 | 0.58 | 35.0 | 4.00e-01 | 76.9% | 80.8% |
| 150595 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.58 | 36.0 | 4.16e-01 | 76.9% | 88.2% |
| 4939162 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.57 | 34.0 | 4.24e-01 | 76.1% | 98.8% |
| 4944787 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.57 | 34.0 | 4.18e-01 | 77.6% | 100.0% |
| 3978798 | 304.146.1.1 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein yjdK › Uncharacterized protein yjdK › GhoS | 0.56 | 35.0 | 4.18e-01 | 76.9% | 94.4% |
| 3168930 | 304.126.1.1 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C › V_ATPase_I | 0.55 | 34.0 | 3.98e-01 | 76.9% | 90.0% |
| 5052854 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.55 | 36.0 | 3.60e-01 | 76.9% | 62.5% |
| 3892177 | 304.9.1.104 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_PARP14_2 | 0.53 | 33.0 | 3.94e-01 | 77.6% | 93.3% |