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S16_GE16_scaffold_10741_prodigal-single.1__X__X__00297

Bact-Vir

S16_GE16_scaffold_10741_prodigal-single.1__X__X__00297

Identity

Kingdom:
phage

Quality

88.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-55
PDB
D2 high residues 59-112
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2jxtA01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.60 46.0 4.24e-01 100.0% 64.5%
1wzlA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 43.0 3.41e-01 100.0% 40.5%
3id9B00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.53 45.0 3.53e-01 100.0% 61.9%
7eu1A02 1.10.132.30 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › RNA polymerase Rpb1 funnel domain 0.52 37.0 2.87e-01 74.1% 70.9%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3987406 3115.6.1.1 a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › RpoY 0.62 53.0 4.85e-01 100.0% 72.0%
4943401 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.62 48.0 4.27e-01 100.0% 57.6%
3633817 221.4.1.21 a+b two layers › beta-Grasp › Nudix › Nudix › PF30669 0.61 49.0 3.07e-01 100.0% 15.9%
4937773 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.60 47.0 4.62e-01 100.0% 82.8%
5074648 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.60 46.0 4.27e-01 100.0% 65.3%
2886668 807.1.1.1 a+b two layers › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) › CpcD 0.56 43.0 4.42e-01 100.0% 90.2%