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S16_GE16_scaffold_10741_prodigal-single.1__X__X__00396
Bact-VirS16_GE16_scaffold_10741_prodigal-single.1__X__X__00396
Identity
- Kingdom:
- phage
Quality
77.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-69
Domain cluster:
representative
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3wirA03 | 2.60.420.10 | Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 | 0.67 | 50.0 | 4.73e-01 | 79.3% | 100.0% |
| 1mdaH00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.66 | 49.0 | 2.96e-01 | 79.3% | 23.4% |
| 2w00A01 | 3.90.1570.50 | Alpha Beta › Alpha-Beta Complex › tt1808, chain A › | 0.64 | 45.0 | 3.27e-01 | 75.9% | 41.5% |
| 6qk7A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.63 | 44.0 | 2.72e-01 | 70.7% | 27.7% |
| 2wesA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.61 | 51.0 | 3.01e-01 | 94.8% | 46.4% |
| 4r3dA03 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 48.0 | 3.70e-01 | 100.0% | 38.0% |
| 6mv2A01 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 43.0 | 3.61e-01 | 77.6% | 73.5% |
| 3s1sA01 | 3.90.1570.30 | Alpha Beta › Alpha-Beta Complex › tt1808, chain A › | 0.59 | 50.0 | 3.66e-01 | 96.6% | 60.4% |
| 1u14A00 | 3.90.950.10 | Alpha Beta › Alpha-Beta Complex › Maf protein › | 0.59 | 51.0 | 3.73e-01 | 100.0% | 92.9% |
| 2giaA00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.59 | 48.0 | 3.61e-01 | 93.1% | 40.3% |
| 3w5mA06 | 2.60.420.10 | Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 | 0.59 | 48.0 | 4.09e-01 | 93.1% | 99.0% |
| 1sfeA01 | 3.30.160.70 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Methylated DNA-protein cysteine methyltransferase domain | 0.58 | 42.0 | 3.78e-01 | 77.6% | 95.1% |
| 2zxqA01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.57 | 40.0 | 2.59e-01 | 74.1% | 80.2% |
| 1wrjA01 | 3.30.160.70 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Methylated DNA-protein cysteine methyltransferase domain | 0.57 | 42.0 | 4.04e-01 | 77.6% | 94.0% |
| 5xyig01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 43.0 | 2.76e-01 | 82.8% | 28.3% |
| 3e1tA02 | 3.30.9.100 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › | 0.57 | 50.0 | 3.63e-01 | 100.0% | 69.3% |
| 2ltrA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 41.0 | 3.33e-01 | 77.6% | 41.9% |
| 2k2jA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 41.0 | 3.28e-01 | 77.6% | 45.3% |
| 3i3lA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.57 | 49.0 | 2.97e-01 | 100.0% | 45.2% |
| 3muuB01 | 2.60.40.3200 | Mainly Beta › Sandwich › Immunoglobulin-like › Alphavirus E2 glycoprotein, A domain | 0.56 | 40.0 | 2.94e-01 | 75.9% | 79.2% |
| 1ym5A01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.56 | 49.0 | 3.67e-01 | 96.6% | 46.3% |
| 4dunA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.55 | 49.0 | 3.76e-01 | 98.3% | 50.4% |
| 3u1wA01 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 50.0 | 3.46e-01 | 100.0% | 45.9% |
| 2w18A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 40.0 | 2.62e-01 | 82.8% | 92.8% |
| 6j4nC01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.54 | 46.0 | 2.95e-01 | 100.0% | 57.8% |
| 2djhA00 | 3.30.2310.30 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › Colicin E5 C-terminal ribonuclease domain (CRD) | 0.53 | 38.0 | 3.21e-01 | 75.9% | 52.1% |
| 3gd0A02 | 3.30.920.50 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Beta-1,3-glucanase, C-terminal domain | 0.53 | 40.0 | 3.30e-01 | 84.5% | 43.8% |
| 1yzbA01 | 3.90.70.40 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.53 | 44.0 | 3.51e-01 | 100.0% | 44.4% |
| 5b0hA00 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.53 | 37.0 | 2.91e-01 | 75.9% | 56.4% |
| 2rjqA02 | 3.40.1620.60 | Alpha Beta › 3-Layer(aba) Sandwich › YefM-like fold › | 0.52 | 38.0 | 3.62e-01 | 81.0% | 84.9% |
| 3i3tA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.52 | 45.0 | 2.92e-01 | 100.0% | 25.7% |
| 1x99A00 | 2.60.270.20 | Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › Cytolysin/lectin | 0.52 | 44.0 | 3.38e-01 | 100.0% | 74.5% |
| 1wgqA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 36.0 | 2.99e-01 | 77.6% | 40.4% |
| 4k22A02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.51 | 44.0 | 3.66e-01 | 100.0% | 92.6% |
| 1wzoA01 | 2.30.30.370 | Mainly Beta › Roll › SH3 type barrels. › FAH | 0.51 | 28.0 | 3.23e-01 | 75.9% | 72.5% |
| 4nkbA01 | 3.30.1120.120 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.50 | 44.0 | 3.59e-01 | 100.0% | 68.4% |
| 1p32B00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.50 | 44.0 | 3.15e-01 | 98.3% | 33.9% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3949260 | 4120.1.1.0 ↗ | few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP | 0.81 | 42.0 | 3.31e-01 | 70.7% | 26.4% |
| 3603282 | 286.1.1.1 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › DAP_epimerase | 0.77 | 54.0 | 3.86e-01 | 72.4% | 41.9% |
| 5079606 | 286.1.1.1 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › DAP_epimerase | 0.76 | 53.0 | 3.76e-01 | 72.4% | 40.9% |
| 3706074 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.71 | 52.0 | 3.18e-01 | 79.3% | 82.7% |
| 3989707 | 214.1.1.8 ↗ | a+b two layers › SH2 › SH2 › SH2 › TnpB_IS66 | 0.69 | 48.0 | 4.20e-01 | 74.1% | 73.3% |
| 3613138 | 12.6.1.1 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related › Glyco_hydro_65C | 0.68 | 57.0 | 5.35e-01 | 91.4% | 95.7% |
| 3254199 | 2003.1.5.38 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › SAM_MT | 0.67 | 47.0 | 2.90e-01 | 74.1% | 43.9% |
| 3707402 | 12.6.1.1 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related › Glyco_hydro_65C | 0.66 | 57.0 | 5.19e-01 | 93.1% | 98.7% |
| 4944549 | 9.1.1.72 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Biotin_lipoyl | 0.66 | 36.0 | 3.44e-01 | 75.9% | 44.3% |
| 3679761 | 5.1.5.117 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Nup88 | 0.66 | 49.0 | 2.83e-01 | 81.0% | 23.3% |
| 4088743 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.66 | 45.0 | 4.53e-01 | 72.4% | 95.0% |
| 4432835 | 5.1.5.117 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Nup88 | 0.66 | 45.0 | 2.66e-01 | 72.4% | 77.6% |
| 4259070 | 375.13.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Toprim_C_rpt | 0.63 | 38.0 | 4.05e-01 | 70.7% | 70.0% |
| 4002701 | 5.1.4.333 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF31099 | 0.63 | 46.0 | 2.77e-01 | 77.6% | 24.6% |
| 3236787 | 2484.1.1.200 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH | 0.62 | 41.0 | 3.19e-01 | 96.6% | 30.8% |
| 4653584 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.62 | 52.0 | 4.14e-01 | 94.8% | 78.3% |
| 3696165 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.61 | 52.0 | 4.12e-01 | 98.3% | 95.2% |
| 3600467 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.61 | 51.0 | 4.20e-01 | 94.8% | 92.7% |
| 4666731 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.61 | 42.0 | 4.01e-01 | 74.1% | 92.9% |
| 1499696 | 12.6.1.1 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related › Glyco_hydro_65C | 0.60 | 48.0 | 4.62e-01 | 84.5% | 87.9% |
| 3822279 | 239.3.1.1 ↗ | beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain › Fasciclin | 0.60 | 50.0 | 3.72e-01 | 93.1% | 41.3% |
| 3666497 | 5.3.1.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › B_lectin | 0.60 | 45.0 | 3.44e-01 | 84.5% | 46.0% |
| 3459291 | 5.1.3.68 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1618 | 0.59 | 42.0 | 2.67e-01 | 75.9% | 34.8% |
| 4224454 | 714.1.1.1 ↗ | beta sandwiches › N-utilization substance G protein NusG, insert domain › N-utilization substance G protein NusG, insert domain › N-utilization substance G protein NusG, insert domain › NusG_II | 0.59 | 48.0 | 4.26e-01 | 91.4% | 62.4% |
| 4960014 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.59 | 47.0 | 3.07e-01 | 91.4% | 48.9% |
| 3907054 | 319.1.1.3 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS | 0.58 | 42.0 | 3.54e-01 | 77.6% | 75.0% |
| 3383629 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 43.0 | 3.27e-01 | 77.6% | 38.5% |
| 3970156 | 286.1.1.0 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like | 0.58 | 49.0 | 3.88e-01 | 93.1% | 53.9% |
| 3868717 | 220.1.1.173 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_CERK | 0.58 | 42.0 | 3.31e-01 | 77.6% | 40.0% |
| 5014668 | 247.1.1.0 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase | 0.57 | 46.0 | 3.43e-01 | 98.3% | 45.5% |
| 4046575 | 286.1.1.2 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF | 0.56 | 46.0 | 3.76e-01 | 94.8% | 65.2% |
| 3716012 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.56 | 47.0 | 2.88e-01 | 94.8% | 36.4% |
| 3957326 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.56 | 47.0 | 3.09e-01 | 96.6% | 60.0% |
| 3164938 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.55 | 39.0 | 2.56e-01 | 75.9% | 30.2% |
| 3464402 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.55 | 38.0 | 3.76e-01 | 74.1% | 69.2% |
| 4457771 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.54 | 39.0 | 3.65e-01 | 77.6% | 88.0% |
| 4466055 | 12.3.1.25 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_36N | 0.54 | 47.0 | 2.98e-01 | 100.0% | 90.2% |
| 5062376 | 5.1.3.9 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › OLF | 0.53 | 39.0 | 2.74e-01 | 84.5% | 40.4% |
| 3966790 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.53 | 46.0 | 3.47e-01 | 100.0% | 70.3% |
| 3656902 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.52 | 44.0 | 3.65e-01 | 96.6% | 84.3% |
| 3930754 | 5.1.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed › Hemopexin | 0.52 | 36.0 | 2.57e-01 | 74.1% | 48.0% |
| 3968690 | 3784.1.1.0 ↗ | a+b two layers › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related | 0.51 | 41.0 | 3.27e-01 | 100.0% | 76.7% |
| 5018558 | 2008.1.1.162 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF30170 | 0.51 | 42.0 | 3.34e-01 | 100.0% | 85.9% |
D2
high
residues 74-219
Domain cluster:
rep: rifcsphigho2_12_scaffold_16_prodigal-single.1__X__X__00370__D51-199
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF14464.12 best | Prok-JAB | 27.4 | 3.80e-06 | 70.5% | 47.4% |
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1oi0A00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.84 | 58.0 | 6.73e-01 | 85.6% | 95.4% |
| 6fnnB01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.81 | 64.0 | 6.52e-01 | 81.5% | 97.9% |
| 2kksA00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.78 | 67.0 | 6.71e-01 | 89.0% | 93.8% |
| 5cw3C01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.76 | 63.0 | 6.30e-01 | 85.6% | 98.0% |
| 2znrA00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.75 | 70.0 | 6.47e-01 | 97.9% | 93.3% |
| 4owpB00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.75 | 65.0 | 6.22e-01 | 91.1% | 94.0% |
| 4f7oA00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.74 | 65.0 | 5.48e-01 | 93.2% | 71.5% |
| 2og4A01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.73 | 68.0 | 5.66e-01 | 100.0% | 73.9% |
| 4d10F01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.72 | 62.0 | 5.76e-01 | 91.1% | 90.5% |
| 2kcqA00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.70 | 59.0 | 5.79e-01 | 87.0% | 91.5% |
| 1gn4A02 | 3.55.40.20 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain | 0.56 | 37.0 | 4.10e-01 | 84.9% | 84.3% |
| 4ffkA02 | 3.55.40.20 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain | 0.55 | 37.0 | 3.94e-01 | 84.9% | 78.9% |
| 3ho6B00 | 3.40.50.11050 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › MARTX cysteine protease (CPD) domain | 0.55 | 43.0 | 3.68e-01 | 82.9% | 87.3% |
| 2ywqA00 | 3.30.160.100 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like | 0.55 | 30.0 | 3.72e-01 | 100.0% | 87.5% |
| 4bi3A01 | 3.90.1720.80 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.53 | 28.0 | 3.35e-01 | 82.2% | 76.9% |
| 1ym5A02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.51 | 39.0 | 3.87e-01 | 94.5% | 74.1% |
| 1jg1A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 40.0 | 3.51e-01 | 82.2% | 85.1% |
| 2gk4A00 | 3.40.50.10300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CoaB-like | 0.51 | 41.0 | 3.56e-01 | 86.3% | 96.1% |
| 3ju7A00 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.50 | 45.0 | 3.38e-01 | 99.3% | 74.5% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4656411 | 2492.1.1.18 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB | 0.84 | 69.0 | 6.88e-01 | 84.9% | 97.3% |
| 3956284 | 2492.1.1.18 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB | 0.83 | 71.0 | 7.16e-01 | 88.4% | 91.7% |
| 5056308 | 2492.1.1.18 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB | 0.83 | 65.0 | 7.08e-01 | 87.7% | 95.2% |
| 5049625 | 2492.1.1.18 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB | 0.83 | 65.0 | 7.15e-01 | 85.6% | 98.3% |
| 4952815 | 2492.1.1.18 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB | 0.82 | 66.0 | 6.88e-01 | 87.7% | 89.6% |
| 5063510 | 2492.1.1.18 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB | 0.82 | 63.0 | 6.93e-01 | 85.6% | 96.7% |
| 4996288 | 2492.1.1.2 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB | 0.81 | 65.0 | 6.81e-01 | 82.9% | 97.0% |
| 4551778 | 2492.1.1.18 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB | 0.81 | 65.0 | 7.10e-01 | 85.6% | 98.4% |
| 4994059 | 2492.1.1.2 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB | 0.81 | 65.0 | 6.79e-01 | 82.9% | 97.0% |
| 4927323 | 2492.1.1.18 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB | 0.81 | 63.0 | 6.85e-01 | 86.3% | 94.4% |
| 5045133 | 2492.1.1.18 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB | 0.81 | 67.0 | 7.03e-01 | 86.3% | 96.3% |
| 4998323 | 2492.1.1.18 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB | 0.80 | 68.0 | 6.85e-01 | 87.7% | 93.8% |
| 4934192 | 2492.1.1.18 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB | 0.80 | 68.0 | 6.95e-01 | 87.7% | 97.1% |
| 4153379 | 2492.1.1.18 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB | 0.80 | 66.0 | 6.80e-01 | 87.7% | 89.3% |
| 5074348 | 2492.1.1.18 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB | 0.80 | 68.0 | 6.96e-01 | 88.4% | 95.7% |
| 4402945 | 2492.1.1.18 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB | 0.80 | 67.0 | 6.91e-01 | 88.4% | 91.4% |
| 4988784 | 2492.1.1.18 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB | 0.79 | 67.0 | 6.94e-01 | 87.7% | 96.4% |
| 4977613 | 2492.1.1.18 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB | 0.79 | 68.0 | 6.93e-01 | 88.4% | 97.1% |
| 4955882 | 2492.1.1.18 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB | 0.79 | 66.0 | 7.06e-01 | 87.0% | 98.5% |
| 4972514 | 2492.1.1.18 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB | 0.79 | 65.0 | 6.68e-01 | 85.6% | 94.3% |
| 5010420 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.79 | 56.0 | 6.55e-01 | 78.8% | 99.1% |
| 136190 | 2492.1.1.18 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB | 0.79 | 66.0 | 6.86e-01 | 88.4% | 98.6% |
| 4207776 | 2492.1.1.2 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB | 0.78 | 66.0 | 6.59e-01 | 89.0% | 96.0% |
| 5049152 | 109.4.1.3609 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › JAB | 0.77 | 71.0 | 4.92e-01 | 97.3% | 89.1% |
| 3378032 | 2492.1.1.2 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB | 0.77 | 65.0 | 5.84e-01 | 88.4% | 91.8% |
| 4981873 | 2492.1.1.2 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB | 0.76 | 70.0 | 6.17e-01 | 97.9% | 92.7% |
| 4946921 | 2492.1.1.2 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB | 0.75 | 68.0 | 6.38e-01 | 95.2% | 93.7% |
| 3996565 | 2492.1.1.2 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB | 0.75 | 66.0 | 5.38e-01 | 92.5% | 74.1% |
| 3671478 | 2492.1.1.2 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB | 0.75 | 55.0 | 6.23e-01 | 79.5% | 100.0% |
| 5053690 | 2492.1.1.2 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB | 0.74 | 62.0 | 6.16e-01 | 87.7% | 96.8% |
| 3570975 | 2492.1.1.2 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB | 0.74 | 56.0 | 5.50e-01 | 78.1% | 89.0% |
| 5070619 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.73 | 63.0 | 5.77e-01 | 92.5% | 87.4% |
| 4646372 | 2492.1.1.2 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB | 0.73 | 66.0 | 5.60e-01 | 95.9% | 75.6% |
| 4527641 | 2492.1.1.2 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB | 0.71 | 61.0 | 5.51e-01 | 91.1% | 87.7% |
| 133840 | 2492.1.1.18 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB | 0.70 | 59.0 | 5.92e-01 | 87.0% | 96.6% |
| 4010712 | 2492.1.1.31 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › DUF4329 | 0.70 | 58.0 | 6.09e-01 | 91.8% | 97.7% |
| 3691249 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.68 | 52.0 | 5.47e-01 | 79.5% | 100.0% |
| 3266139 | 2492.1.1.1 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › dCMP_cyt_deam_1 | 0.68 | 52.0 | 5.29e-01 | 79.5% | 90.0% |
| 5005245 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.55 | 43.0 | 3.77e-01 | 84.2% | 82.2% |
| 3511271 | 214.1.1.10 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7145 | 0.54 | 33.0 | 3.70e-01 | 89.0% | 76.5% |
| 5052959 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 22.0 | 3.49e-01 | 85.6% | 100.0% |
| None | — | 0.51 | 40.0 | 3.89e-01 | 82.9% | 90.6% |