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S16_GE16_scaffold_10741_prodigal-single.1__X__X__00404
Bact-VirS16_GE16_scaffold_10741_prodigal-single.1__X__X__00404
Identity
- Kingdom:
- phage
Quality
72.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 184-275
Domain cluster:
rep: cathepsin__YP_006607808__Apocheima_cinerarium_nucleopolyhedrovirus__307461__D59-159
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00112.30 best | Peptidase_C1 | 23.1 | 9.90e-05 | 98.9% | 41.4% |
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3k8uA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.78 | 56.0 | 4.93e-01 | 96.7% | 52.7% |
| 3b79A00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.76 | 52.0 | 4.71e-01 | 96.7% | 52.0% |
| 3p8bB02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 48.0 | 5.60e-01 | 97.8% | 100.0% |
| 2dl5A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.72 | 50.0 | 5.37e-01 | 85.9% | 83.3% |
| 3h8zA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 39.0 | 5.04e-01 | 73.9% | 100.0% |
| 2btwA00 | 3.90.70.30 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Phytochelatin synthase, N-terminal domain | 0.72 | 66.0 | 4.94e-01 | 100.0% | 43.3% |
| 4ii1A02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 43.0 | 5.35e-01 | 94.6% | 100.0% |
| 2eqmA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 41.0 | 5.22e-01 | 79.3% | 100.0% |
| 4h75A00 | 2.80.10.70 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty | 0.70 | 52.0 | 4.00e-01 | 97.8% | 35.7% |
| 5kcoA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 41.0 | 5.01e-01 | 88.0% | 91.5% |
| 2eqjA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 42.0 | 4.83e-01 | 92.4% | 83.3% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 43.0 | 4.84e-01 | 98.9% | 82.6% |
| 2digA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 42.0 | 4.80e-01 | 92.4% | 83.8% |
| 2ct4A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 45.0 | 5.04e-01 | 82.6% | 88.6% |
| 1mhnA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 42.0 | 5.01e-01 | 94.6% | 96.6% |
| 2ckkA02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 41.0 | 5.08e-01 | 88.0% | 100.0% |
| 1y96D00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 49.0 | 5.12e-01 | 95.7% | 84.3% |
| 2vb6A01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.65 | 37.0 | 4.51e-01 | 80.4% | 92.6% |
| 2rqrA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.64 | 43.0 | 4.00e-01 | 85.9% | 53.8% |
| 2egeA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.64 | 45.0 | 4.96e-01 | 83.7% | 92.0% |
| 4mi7A00 | 3.90.70.170 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.63 | 56.0 | 5.04e-01 | 100.0% | 71.8% |
| 1t0hA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 45.0 | 4.50e-01 | 75.0% | 71.9% |
| 3feoB02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 45.0 | 4.71e-01 | 92.4% | 86.7% |
| 1vwxA02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 47.0 | 5.03e-01 | 97.8% | 97.5% |
| 1okeB02 | 3.30.67.10 | Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 | 0.59 | 36.0 | 3.88e-01 | 82.6% | 72.7% |
| 5zr6A02 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.58 | 45.0 | 4.81e-01 | 95.7% | 100.0% |
| 1r77A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 45.0 | 4.46e-01 | 89.1% | 100.0% |
| 3dnhA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 42.0 | 3.61e-01 | 89.1% | 85.4% |
| 4b9wA01 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 37.0 | 3.53e-01 | 76.1% | 88.9% |
| 3bzcA02 | 1.10.3500.10 | Mainly Alpha › Orthogonal Bundle › Tex N-terminal region-like › Tex N-terminal region-like | 0.51 | 33.0 | 2.44e-01 | 89.1% | 23.1% |
| 1havB02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.51 | 40.0 | 3.86e-01 | 83.7% | 98.1% |
| 3zx7A02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.51 | 38.0 | 3.46e-01 | 83.7% | 97.1% |
| 3szeA01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.51 | 45.0 | 3.16e-01 | 100.0% | 47.1% |
| 3n7cA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 38.0 | 3.62e-01 | 79.3% | 96.3% |
| 1vjvA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.51 | 45.0 | 3.15e-01 | 100.0% | 47.5% |
| 1qwdB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 44.0 | 3.72e-01 | 100.0% | 70.5% |
| 7wguB01 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.50 | 36.0 | 3.67e-01 | 92.4% | 75.8% |
| 1914A00 | 3.30.720.10 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 | 0.50 | 42.0 | 3.43e-01 | 91.3% | 93.6% |
ECOD (71)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3252600 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.80 | 72.0 | 5.42e-01 | 96.7% | 44.7% |
| 5046498 | 219.1.1.51 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 | 0.80 | 64.0 | 5.12e-01 | 96.7% | 46.7% |
| 3764000 | 219.1.1.78 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Guanylate_cyc_2 | 0.79 | 65.0 | 6.22e-01 | 96.7% | 76.2% |
| 4998726 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 45.0 | 4.86e-01 | 94.6% | 66.3% |
| 3650468 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.77 | 70.0 | 5.70e-01 | 96.7% | 61.3% |
| 185067 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.76 | 52.0 | 4.72e-01 | 96.7% | 52.4% |
| 3260732 | 219.1.1.78 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Guanylate_cyc_2 | 0.76 | 65.0 | 4.91e-01 | 100.0% | 40.0% |
| 4855772 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.76 | 68.0 | 5.69e-01 | 96.7% | 62.7% |
| 3575865 | 4.1.1.169 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4819 | 0.75 | 50.0 | 5.64e-01 | 96.7% | 90.0% |
| 3716697 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.74 | 66.0 | 4.80e-01 | 100.0% | 36.3% |
| 3898952 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.74 | 51.0 | 5.54e-01 | 92.4% | 86.7% |
| 3701950 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 45.0 | 5.42e-01 | 96.7% | 95.0% |
| 4998870 | 4.1.1.483 ↗ | beta barrels › SH3 › SH3 › SH3 › RRXRR | 0.73 | 43.0 | 4.52e-01 | 94.6% | 63.5% |
| 4937587 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.73 | 60.0 | 4.92e-01 | 100.0% | 49.7% |
| 4346242 | 219.1.1.153 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › BtrH_N | 0.72 | 66.0 | 5.23e-01 | 100.0% | 51.4% |
| 3643302 | 219.1.1.78 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Guanylate_cyc_2 | 0.72 | 65.0 | 4.82e-01 | 96.7% | 44.1% |
| 3703970 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 62.0 | 5.95e-01 | 95.7% | 81.0% |
| 3504417 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.72 | 45.0 | 4.63e-01 | 97.8% | 65.6% |
| 3905176 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.72 | 49.0 | 5.65e-01 | 90.2% | 100.0% |
| 3395150 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 45.0 | 5.42e-01 | 92.4% | 100.0% |
| 3398496 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.71 | 42.0 | 5.15e-01 | 90.2% | 98.2% |
| 3880325 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.71 | 44.0 | 4.90e-01 | 77.2% | 81.4% |
| 3172078 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.70 | 58.0 | 4.29e-01 | 100.0% | 34.6% |
| 3587337 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.70 | 46.0 | 3.93e-01 | 95.7% | 41.3% |
| 4675879 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.70 | 59.0 | 4.26e-01 | 100.0% | 32.5% |
| 3793311 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.70 | 45.0 | 5.33e-01 | 79.3% | 100.0% |
| 3591607 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.69 | 63.0 | 4.58e-01 | 100.0% | 38.4% |
| 3448975 | 4.1.1.66 ↗ | beta barrels › SH3 › SH3 › SH3 › LBR_tudor | 0.69 | 46.0 | 5.32e-01 | 88.0% | 96.9% |
| 4882197 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.69 | 53.0 | 4.90e-01 | 96.7% | 63.6% |
| 3926118 | 4.1.1.223 ↗ | beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st | 0.69 | 44.0 | 5.29e-01 | 89.1% | 100.0% |
| 4524466 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.68 | 43.0 | 4.88e-01 | 97.8% | 84.3% |
| 3928136 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 44.0 | 5.26e-01 | 92.4% | 100.0% |
| 3344796 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.68 | 45.0 | 4.70e-01 | 91.3% | 74.7% |
| 3928430 | 4.1.1.223 ↗ | beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st | 0.68 | 45.0 | 5.00e-01 | 92.4% | 88.6% |
| 4608704 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.68 | 53.0 | 3.96e-01 | 100.0% | 32.9% |
| 3625555 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.67 | 40.0 | 4.96e-01 | 75.0% | 100.0% |
| 3301015 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 46.0 | 5.26e-01 | 92.4% | 100.0% |
| 4420173 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.67 | 44.0 | 4.75e-01 | 97.8% | 81.3% |
| 3514556 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 44.0 | 4.97e-01 | 96.7% | 88.6% |
| 3926175 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 46.0 | 4.84e-01 | 98.9% | 77.6% |
| 4105328 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.66 | 40.0 | 4.65e-01 | 90.2% | 86.2% |
| 4268386 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 47.0 | 5.26e-01 | 98.9% | 98.6% |
| 3782999 | 219.1.1.115 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › AIM3_BBC1_C | 0.65 | 56.0 | 4.79e-01 | 100.0% | 59.3% |
| 3176702 | 219.1.1.115 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › AIM3_BBC1_C | 0.65 | 58.0 | 4.89e-01 | 100.0% | 60.0% |
| 3298989 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 44.0 | 4.19e-01 | 98.9% | 60.0% |
| 3619619 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 41.0 | 4.63e-01 | 95.7% | 87.1% |
| 4091533 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.63 | 45.0 | 5.06e-01 | 81.5% | 98.6% |
| 2141735 | 219.1.1.69 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › GtgE | 0.63 | 57.0 | 4.44e-01 | 100.0% | 50.8% |
| 3593222 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 52.0 | 5.47e-01 | 97.8% | 100.0% |
| 3492018 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 47.0 | 4.53e-01 | 98.9% | 69.5% |
| 3723101 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 40.0 | 4.61e-01 | 75.0% | 100.0% |
| 3787112 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 43.0 | 4.60e-01 | 88.0% | 86.3% |
| 3166879 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.60 | 41.0 | 4.70e-01 | 93.5% | 100.0% |
| 3787137 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 45.0 | 4.68e-01 | 96.7% | 88.2% |
| 3879747 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 49.0 | 5.09e-01 | 95.7% | 98.8% |
| 1826883 | 4.1.1.83 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_6 | 0.58 | 46.0 | 4.87e-01 | 83.7% | 100.0% |
| 1442407 | 4.1.1.38 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C | 0.58 | 46.0 | 3.66e-01 | 97.8% | 42.7% |
| 3397845 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 44.0 | 4.27e-01 | 98.9% | 72.4% |
| 3838867 | 4.1.1.82 ↗ | beta barrels › SH3 › SH3 › SH3 › N_NLPC_P60,SH3_6 | 0.57 | 46.0 | 3.93e-01 | 83.7% | 55.0% |
| 4933205 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.56 | 47.0 | 4.74e-01 | 96.7% | 92.2% |
| 4299723 | 2.8.1.1 ↗ | beta barrels › OB-fold › mu transposases-C › mu transposases-C › Mu-transpos_C | 0.56 | 37.0 | 4.15e-01 | 71.7% | 88.6% |
| 3688068 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.55 | 49.0 | 4.18e-01 | 100.0% | 60.7% |
| 4037095 | 1.1.5.36 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyrid_ox_like | 0.55 | 45.0 | 3.72e-01 | 89.1% | 85.5% |
| 3928050 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 40.0 | 3.57e-01 | 98.9% | 52.6% |
| 4200330 | 4.1.1.249 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 | 0.53 | 48.0 | 4.35e-01 | 100.0% | 88.0% |
| 3780847 | 4.1.1.187 ↗ | beta barrels › SH3 › SH3 › SH3 › DIRP | 0.51 | 45.0 | 3.87e-01 | 97.8% | 71.3% |
| 3276050 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.51 | 40.0 | 3.01e-01 | 84.8% | 45.5% |
| 3476478 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 41.0 | 4.10e-01 | 92.4% | 84.2% |
| 3244497 | 4.1.1.187 ↗ | beta barrels › SH3 › SH3 › SH3 › DIRP | 0.50 | 44.0 | 3.77e-01 | 96.7% | 71.3% |
| 4373881 | 814.1.1.2 ↗ | a+b two layers › Chorismate lyase › Chorismate lyase › Chorismate lyase › Chor_lyase | 0.50 | 39.0 | 3.32e-01 | 87.0% | 90.6% |
| 3662854 | 4.1.1.187 ↗ | beta barrels › SH3 › SH3 › SH3 › DIRP | 0.50 | 45.0 | 3.72e-01 | 98.9% | 85.5% |