←Back to structures

S16_GE16_scaffold_5545_prodigal-single.1__X__X__00166

Bact-Vir

S16_GE16_scaffold_5545_prodigal-single.1__X__X__00166

Identity

Kingdom:
phage

Quality

81.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-76
PDB
Domain cluster: representative
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4h2uD00 1.10.1200.10 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like 0.77 66.0 6.43e-01 100.0% 87.2%
2n5hA00 1.10.1200.10 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like 0.77 69.0 6.40e-01 100.0% 83.3%
5gxvA02 1.10.1200.10 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like 0.76 68.0 6.16e-01 100.0% 76.0%
2cgqA00 1.10.1200.10 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like 0.76 65.0 6.51e-01 100.0% 93.2%
7ar7T01 1.10.1200.10 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like 0.75 62.0 6.19e-01 100.0% 88.0%
2mr7A00 1.10.1200.10 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like 0.75 63.0 5.88e-01 100.0% 73.6%
4neoA00 1.10.1200.10 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like 0.75 63.0 6.06e-01 100.0% 80.7%
1dv5A00 1.10.1200.10 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like 0.75 65.0 6.35e-01 100.0% 88.7%
5kp7B00 1.10.1200.10 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like 0.74 65.0 6.33e-01 100.0% 88.6%
4pxhB00 1.10.1200.10 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like 0.74 61.0 6.08e-01 100.0% 89.3%
2cq8A01 1.10.1200.10 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like 0.74 63.0 6.06e-01 100.0% 84.0%
5mswA01 1.10.1200.10 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like 0.73 64.0 5.90e-01 100.0% 76.1%
5es8A03 1.10.1200.10 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like 0.73 59.0 5.94e-01 100.0% 90.3%
2l22A01 1.10.1200.10 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like 0.72 61.0 5.74e-01 100.0% 75.8%
2l4bA00 1.10.1200.10 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like 0.72 64.0 6.01e-01 100.0% 83.0%
2xz0D00 1.10.1200.10 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like 0.72 62.0 5.99e-01 100.0% 85.4%
7e42A01 1.10.1200.10 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like 0.71 63.0 6.34e-01 100.0% 98.6%
7qv0F01 1.10.1200.10 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like 0.70 61.0 5.91e-01 100.0% 88.9%
4k17B03 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.60 45.0 2.69e-01 79.2% 19.2%
3b40A02 1.10.287.650 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › L27 domain 0.57 40.0 4.39e-01 100.0% 93.1%
4ag6A02 1.10.8.730 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.57 44.0 3.82e-01 83.3% 62.7%
1h2tC03 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.55 39.0 2.75e-01 76.4% 43.0%
4evfA02 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.54 40.0 3.97e-01 77.8% 97.3%
2eb4D00 3.90.850.10 Alpha Beta › Alpha-Beta Complex › Fumarylacetoacetate hydrolase; domain 2 › Fumarylacetoacetase-like, C-terminal domain 0.53 43.0 2.98e-01 88.9% 61.2%
1n00A01 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.53 39.0 3.75e-01 77.8% 85.7%
4hreA03 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.53 37.0 3.53e-01 72.2% 86.2%
4q6lA00 3.40.50.10610 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component 0.53 42.0 3.45e-01 87.5% 88.1%
4zvaA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.53 41.0 3.34e-01 87.5% 74.5%
4bx8A04 1.25.40.850 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Sec1/Munc18 (SM) protein, domain 3b 0.51 39.0 3.60e-01 80.6% 85.9%
1dk5A02 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.51 39.0 3.98e-01 81.9% 98.6%
2m4eA00 1.20.120.1930 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein PF16691 family 0.51 41.0 3.87e-01 93.1% 73.3%
ECOD (45)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3283180 132.1.1.1 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding 0.80 68.0 6.21e-01 100.0% 70.5%
3961879 132.1.1.1 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding 0.80 68.0 6.16e-01 100.0% 70.5%
4449631 132.1.1.1 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding 0.79 69.0 6.65e-01 100.0% 86.3%
3288781 132.1.1.1 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding 0.79 67.0 6.32e-01 100.0% 78.8%
4159101 132.1.1.1 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding 0.78 65.0 6.48e-01 100.0% 88.0%
3285196 132.1.1.1 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding 0.78 66.0 5.80e-01 100.0% 63.8%
3279000 132.1.1.1 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding 0.78 66.0 6.01e-01 100.0% 70.5%
4501236 132.1.1.1 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding 0.77 64.0 6.48e-01 98.6% 92.9%
162425 132.1.1.1 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding 0.77 64.0 5.80e-01 100.0% 66.7%
3287263 132.1.1.1 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding 0.77 65.0 6.17e-01 100.0% 78.8%
3582699 132.1.1.1 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding 0.76 64.0 5.97e-01 100.0% 74.4%
3994179 132.1.1.1 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding 0.76 64.0 6.08e-01 100.0% 78.8%
3961382 132.1.1.1 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding 0.76 66.0 6.35e-01 100.0% 85.0%
3112152 132.1.1.1 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding 0.75 64.0 6.30e-01 100.0% 88.2%
3283880 132.1.1.1 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding 0.75 62.0 5.94e-01 100.0% 77.6%
3287624 132.1.1.1 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding 0.75 65.0 6.29e-01 100.0% 86.3%
4316181 132.1.1.1 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding 0.75 63.0 5.77e-01 100.0% 70.5%
3957923 132.1.1.1 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding 0.75 61.0 5.75e-01 100.0% 73.3%
5079901 132.1.1.1 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding 0.74 61.0 6.23e-01 91.7% 94.1%
4015733 132.1.1.0 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) 0.74 62.0 5.59e-01 100.0% 66.0%
1884107 132.1.1.1 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding 0.74 65.0 6.33e-01 100.0% 88.6%
4587402 132.1.1.1 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding 0.74 64.0 5.98e-01 100.0% 77.8%
3903041 132.1.1.0 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) 0.74 63.0 6.00e-01 100.0% 81.2%
4360469 132.1.1.1 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding 0.73 62.0 5.41e-01 100.0% 61.8%
4018510 132.1.1.1 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding 0.73 62.0 5.74e-01 100.0% 72.6%
3387877 132.1.1.0 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) 0.73 62.0 6.34e-01 98.6% 98.6%
2103370 385.1.1.0 ↗ few secondary structure elements › Cystine-knot cytokines › Cystine-knot cytokines › Cystine-knot cytokines 0.73 64.0 5.99e-01 97.2% 83.1%
3288270 132.1.1.1 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding 0.73 61.0 5.80e-01 100.0% 78.8%
3722872 132.1.1.1 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding 0.73 63.0 6.01e-01 100.0% 82.4%
3290586 132.1.1.1 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding 0.72 63.0 6.10e-01 100.0% 87.5%
3277050 132.1.1.1 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding 0.72 61.0 5.85e-01 100.0% 81.2%
4518850 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.72 60.0 3.70e-01 100.0% 14.8%
4266166 132.1.1.1 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding 0.71 62.0 5.53e-01 100.0% 67.6%
5061121 132.1.1.1 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding 0.71 59.0 5.89e-01 100.0% 89.3%
3959794 132.1.1.0 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) 0.70 60.0 5.47e-01 100.0% 71.0%
3285861 132.1.1.1 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding 0.69 56.0 5.60e-01 100.0% 88.0%
3525072 132.1.1.1 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding 0.68 60.0 5.62e-01 100.0% 80.0%
3994432 132.1.1.1 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding 0.63 52.0 4.99e-01 100.0% 81.2%
3221803 132.1.1.0 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) 0.60 52.0 5.06e-01 100.0% 90.0%
3989453 162.1.1.1 ↗ alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PRD 0.60 48.0 4.20e-01 88.9% 80.9%
3943441 101.1.4.2 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › LacI 0.58 39.0 4.43e-01 75.0% 100.0%
4539198 3265.1.1.1 ↗ alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st 0.57 43.0 4.13e-01 87.5% 76.7%
3686516 193.1.1.11 ↗ alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like › CDC24 0.53 46.0 3.65e-01 100.0% 71.6%
3804011 109.4.1.1336 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_3 0.53 41.0 3.29e-01 88.9% 58.7%
3392972 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 39.0 3.03e-01 81.9% 69.4%