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S16_GE16_scaffold_5545_prodigal-single.1__X__X__00220
Bact-VirS16_GE16_scaffold_5545_prodigal-single.1__X__X__00220
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-100_195-204
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1tifA00 | 3.10.20.80 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Translation initiation factor 3 (IF-3), N-terminal domain | 0.51 | 27.0 | 3.04e-01 | 86.9% | 65.8% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4108510 | 221.2.1.1 ↗ | a+b two layers › beta-Grasp › IF3-N › IF3-N › IF3_N | 0.57 | 27.0 | 3.10e-01 | 98.1% | 58.7% |
| 3502554 | 221.2.1.1 ↗ | a+b two layers › beta-Grasp › IF3-N › IF3-N › IF3_N | 0.56 | 31.0 | 3.63e-01 | 87.9% | 83.1% |
| 3600318 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.56 | 36.0 | 4.03e-01 | 97.2% | 87.5% |
| 3668077 | 221.2.1.1 ↗ | a+b two layers › beta-Grasp › IF3-N › IF3-N › IF3_N | 0.55 | 29.0 | 3.31e-01 | 87.9% | 68.0% |
| 3719864 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.53 | 42.0 | 4.32e-01 | 88.8% | 100.0% |
| 3444078 | 221.1.1.82 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PADRE | 0.51 | 36.0 | 3.57e-01 | 84.1% | 70.9% |
D2
high
residues 108-186
Domain cluster:
rep: SR-VP_0-2_scaffold_141_4556078_prodigal-single.1__X__X__00088__D33-109
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF14279.13 best | HNH_5 | 33.3 | 5.30e-08 | 70.9% | 92.9% |
| PF13395.13 | HNH_4 | 41.7 | 1.20e-10 | 62.0% | 96.3% |
| PF01844.30 | HNH | 27.0 | 5.60e-06 | 59.5% | 70.2% |