←Back to structures

S16_GE16_scaffold_5545_prodigal-single.1__X__X__00231

Bact-Vir

S16_GE16_scaffold_5545_prodigal-single.1__X__X__00231

Identity

Kingdom:
phage

Quality

80.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-104
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 30.0 3.79e-01 70.4% 94.3%
3e4wA02 2.40.180.10 Mainly Beta › Beta Barrel › Catalase HpII, Chain A, domain 1 › Catalase core domain 0.54 46.0 3.65e-01 93.9% 99.0%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3531867 4026.1.1.1 ↗ a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › Rap-GAP_dimer 0.53 41.0 3.44e-01 85.7% 54.4%
5032977 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 37.0 3.96e-01 77.6% 88.7%
3490245 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 35.0 3.62e-01 70.4% 82.2%
4955287 1.1.5.10 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.50 36.0 3.03e-01 83.7% 41.7%
4564828 4026.1.1.1 ↗ a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › Rap-GAP_dimer 0.50 41.0 3.57e-01 89.8% 63.2%
337170 2.19.1.1 ↗ beta barrels › OB-fold › Putative membrane protein › Putative membrane protein › DUF3239 0.50 36.0 3.39e-01 77.6% 91.5%