←Back to structures
S16_GE16_scaffold_5545_prodigal-single.1__X__X__00260
Bact-VirS16_GE16_scaffold_5545_prodigal-single.1__X__X__00260
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-82
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 51.0 | 5.33e-01 | 90.3% | 75.4% |
| 2f5kA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 51.0 | 5.99e-01 | 87.5% | 100.0% |
| 2l89A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 51.0 | 4.44e-01 | 88.9% | 53.7% |
| 3kxtA00 | 2.30.30.610 | Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 | 0.67 | 45.0 | 4.92e-01 | 81.9% | 89.3% |
| 2qggA01 | 2.40.30.60 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM | 0.63 | 43.0 | 3.98e-01 | 91.7% | 54.8% |
| 4iupB01 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.62 | 46.0 | 4.89e-01 | 91.7% | 93.5% |
| 4dq2A03 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 39.0 | 4.50e-01 | 90.3% | 97.9% |
| 1whlA00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.61 | 50.0 | 4.56e-01 | 88.9% | 81.1% |
| 1jb0E00 | 2.30.30.50 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 50.0 | 5.09e-01 | 88.9% | 92.8% |
| 3ptaA04 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.60 | 50.0 | 3.71e-01 | 91.7% | 75.3% |
| 6p3qA02 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.60 | 49.0 | 3.86e-01 | 91.7% | 69.0% |
| 1whmA01 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.60 | 48.0 | 4.80e-01 | 88.9% | 100.0% |
| 4p5nA00 | 2.30.30.1060 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 47.0 | 4.69e-01 | 93.1% | 81.1% |
| 2xfmA00 | 2.170.260.10 | Mainly Beta › Beta Complex › paz domain › paz domain | 0.60 | 50.0 | 4.21e-01 | 90.3% | 71.7% |
| 2f1lA01 | 2.40.30.60 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM | 0.60 | 41.0 | 3.84e-01 | 93.1% | 57.3% |
| 1dj7B00 | 2.30.30.50 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 47.0 | 4.70e-01 | 88.9% | 94.5% |
| 2hcjB02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.56 | 42.0 | 3.83e-01 | 90.3% | 60.6% |
| 1orfA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.54 | 35.0 | 3.11e-01 | 98.6% | 44.8% |
| 3agjF01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.53 | 42.0 | 3.53e-01 | 87.5% | 55.9% |
| 1xp4C02 | 2.60.410.10 | Mainly Beta › Sandwich › Peptidoglycan synthesis regulatory factor (PBP3), Domain 2 › D-Ala-D-Ala carboxypeptidase, C-terminal domain | 0.53 | 39.0 | 3.66e-01 | 79.2% | 91.1% |
| 3vygD00 | 2.30.30.50 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 41.0 | 3.60e-01 | 90.3% | 73.9% |
| 3wndA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.51 | 43.0 | 3.96e-01 | 100.0% | 71.3% |
| 7syvx01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.50 | 43.0 | 3.54e-01 | 97.2% | 59.1% |
ECOD (67)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4025829 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 50.0 | 5.61e-01 | 88.9% | 89.1% |
| 3557649 | 4.8.1.20 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › PWP3A-B_N | 0.74 | 57.0 | 4.97e-01 | 90.3% | 56.2% |
| 3937478 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.74 | 57.0 | 4.95e-01 | 91.7% | 54.5% |
| 3570369 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.73 | 52.0 | 4.78e-01 | 90.3% | 58.9% |
| 3750522 | 4.1.1.218 ↗ | beta barrels › SH3 › SH3 › SH3 › PWP3A-B_N | 0.73 | 56.0 | 4.84e-01 | 90.3% | 53.6% |
| 4937389 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.73 | 50.0 | 4.29e-01 | 88.9% | 46.4% |
| 5066224 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.73 | 50.0 | 4.61e-01 | 88.9% | 56.7% |
| 3824699 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.71 | 52.0 | 5.49e-01 | 93.1% | 86.2% |
| 3848399 | 4.8.1.24 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_MORC2_6th | 0.71 | 52.0 | 5.34e-01 | 88.9% | 80.0% |
| 3913782 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 52.0 | 5.54e-01 | 90.3% | 89.1% |
| 1826911 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.68 | 55.0 | 5.14e-01 | 93.1% | 72.4% |
| 145843 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.67 | 51.0 | 4.44e-01 | 88.9% | 53.7% |
| 3853598 | 4.25.1.2 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › BRWD_AD | 0.67 | 48.0 | 4.69e-01 | 90.3% | 68.8% |
| 3754343 | 4.1.1.311 ↗ | beta barrels › SH3 › SH3 › SH3 › BRWD_AD | 0.67 | 48.0 | 4.79e-01 | 90.3% | 73.3% |
| 3730835 | 4.8.1.10 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like | 0.67 | 54.0 | 4.90e-01 | 95.8% | 66.3% |
| 3931055 | 4.1.1.311 ↗ | beta barrels › SH3 › SH3 › SH3 › BRWD_AD | 0.66 | 53.0 | 5.24e-01 | 90.3% | 81.3% |
| 4997059 | 4.1.1.139 ↗ | beta barrels › SH3 › SH3 › SH3 › IF5A-like_N | 0.66 | 50.0 | 4.97e-01 | 90.3% | 78.7% |
| 3399965 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 48.0 | 4.52e-01 | 90.3% | 63.3% |
| 3216974 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.65 | 54.0 | 5.20e-01 | 88.9% | 93.8% |
| 4549698 | 4.8.1.10 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like | 0.64 | 56.0 | 5.07e-01 | 95.8% | 72.6% |
| 3485761 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 54.0 | 4.00e-01 | 93.1% | 47.2% |
| 4682440 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.62 | 42.0 | 3.86e-01 | 90.3% | 53.7% |
| 3881192 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 50.0 | 3.82e-01 | 88.9% | 38.8% |
| 3691620 | 4.1.1.225 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7025 | 0.62 | 51.0 | 4.39e-01 | 91.7% | 72.2% |
| 3729690 | 4.1.1.170 ↗ | beta barrels › SH3 › SH3 › SH3 › Rad9_Rad53_bind | 0.62 | 50.0 | 4.62e-01 | 90.3% | 80.0% |
| 3997130 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 50.0 | 4.53e-01 | 90.3% | 82.0% |
| 3867207 | 4.8.1.10 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like | 0.61 | 52.0 | 4.74e-01 | 95.8% | 70.5% |
| 3782292 | 4.1.1.170 ↗ | beta barrels › SH3 › SH3 › SH3 › Rad9_Rad53_bind | 0.61 | 51.0 | 4.92e-01 | 90.3% | 82.5% |
| 3607981 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 47.0 | 4.73e-01 | 93.1% | 81.1% |
| 3612351 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 49.0 | 4.86e-01 | 88.9% | 88.0% |
| 3912620 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.61 | 48.0 | 4.66e-01 | 86.1% | 93.8% |
| 574 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.60 | 48.0 | 4.47e-01 | 88.9% | 78.3% |
| 3709896 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 48.0 | 4.62e-01 | 88.9% | 78.8% |
| 3929839 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 54.0 | 4.35e-01 | 100.0% | 84.4% |
| 5048974 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 47.0 | 4.15e-01 | 88.9% | 58.2% |
| 3626389 | 4.1.1.310 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26050 | 0.59 | 47.0 | 4.39e-01 | 88.9% | 70.0% |
| 3761319 | 4.1.1.253 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4537 | 0.58 | 45.0 | 4.69e-01 | 88.9% | 92.3% |
| 3902990 | 4.1.1.311 ↗ | beta barrels › SH3 › SH3 › SH3 › BRWD_AD | 0.58 | 50.0 | 4.67e-01 | 97.2% | 87.8% |
| 3735291 | 4161.1.1.2 ↗ | beta complex topology › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC_N | 0.58 | 43.0 | 3.59e-01 | 79.2% | 63.2% |
| 3935042 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.57 | 46.0 | 3.97e-01 | 86.1% | 60.9% |
| 3596672 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.57 | 46.0 | 3.68e-01 | 100.0% | 43.4% |
| 3219409 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 46.0 | 4.28e-01 | 87.5% | 81.1% |
| 3923766 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 46.0 | 4.00e-01 | 90.3% | 69.6% |
| 5059830 | 4.7.1.0 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 | 0.55 | 44.0 | 4.12e-01 | 88.9% | 74.4% |
| 4605381 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.55 | 38.0 | 3.69e-01 | 100.0% | 63.1% |
| 4422325 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 43.0 | 4.03e-01 | 88.9% | 75.3% |
| 4109849 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.53 | 37.0 | 3.58e-01 | 100.0% | 62.4% |
| 3721062 | 4.1.1.225 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7025 | 0.53 | 43.0 | 4.07e-01 | 87.5% | 77.6% |
| 3978877 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.53 | 37.0 | 3.46e-01 | 88.9% | 57.8% |
| 4575287 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.53 | 38.0 | 3.28e-01 | 100.0% | 47.8% |
| 4174934 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.53 | 37.0 | 3.59e-01 | 100.0% | 63.9% |
| 3638533 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.53 | 47.0 | 3.81e-01 | 100.0% | 57.9% |
| 4485646 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.52 | 37.0 | 3.56e-01 | 100.0% | 63.5% |
| 4313846 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.52 | 37.0 | 3.31e-01 | 100.0% | 51.9% |
| 4493293 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.52 | 37.0 | 3.26e-01 | 100.0% | 50.0% |
| 4336111 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.52 | 37.0 | 3.32e-01 | 100.0% | 52.4% |
| 4164205 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.52 | 36.0 | 3.52e-01 | 98.6% | 66.7% |
| 4493480 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.52 | 37.0 | 3.29e-01 | 100.0% | 51.9% |
| 4085638 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.52 | 36.0 | 3.23e-01 | 100.0% | 51.0% |
| 4124823 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.52 | 37.0 | 3.28e-01 | 100.0% | 51.4% |
| 5000523 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.51 | 41.0 | 3.51e-01 | 88.9% | 56.7% |
| 4932728 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.51 | 46.0 | 3.93e-01 | 100.0% | 69.6% |
| 4519471 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.51 | 37.0 | 3.54e-01 | 100.0% | 66.7% |
| 1125236 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.51 | 36.0 | 3.16e-01 | 100.0% | 49.5% |
| 3781969 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.51 | 37.0 | 3.08e-01 | 81.9% | 92.4% |
| 3603127 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.50 | 40.0 | 3.80e-01 | 100.0% | 72.2% |
| 4220865 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.50 | 38.0 | 3.28e-01 | 100.0% | 51.3% |