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S20_GE20_scaffold_13766_prodigal-single.1__X__X__00104

Bact-Vir

S20_GE20_scaffold_13766_prodigal-single.1__X__X__00104

Identity

Kingdom:
phage

Quality

64.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 81-193
PDB
Domain cluster: rep: SRR1747055_scaffold_2_prodigal-single.1__X__X__00342__D202-325
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6su1D01 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.53 36.0 4.03e-01 96.5% 90.0%
2q7nA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 27.0 3.11e-01 97.3% 67.9%
3cb0D00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 40.0 3.61e-01 84.1% 78.9%
2r0xA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 40.0 3.59e-01 84.1% 80.8%
4xhyA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 40.0 3.54e-01 84.1% 75.8%
2r6vA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.50 39.0 3.51e-01 84.1% 78.0%
1i0rA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.50 39.0 3.56e-01 85.0% 81.4%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3516562 1.1.7.9 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c 0.53 34.0 3.21e-01 98.2% 52.1%
4512371 1.1.5.10 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.51 40.0 3.58e-01 83.2% 77.5%
D2 medium residues 5-64
PDB