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S20_GE20_scaffold_13766_prodigal-single.1__X__X__00192
Bact-VirS20_GE20_scaffold_13766_prodigal-single.1__X__X__00192
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-118
Domain cluster:
representative
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6vudA02 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.83 | 56.0 | 6.59e-01 | 80.6% | 98.7% |
| 1dd5A02 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.83 | 56.0 | 6.56e-01 | 80.6% | 98.7% |
| 1wihA00 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.77 | 55.0 | 6.16e-01 | 88.9% | 95.2% |
| 3madA02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.62 | 38.0 | 3.59e-01 | 82.4% | 48.9% |
| 1vkwA02 | 3.40.109.30 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › putative nitroreductase (tm1586), domain 2 | 0.62 | 46.0 | 4.86e-01 | 86.1% | 88.5% |
| 1fg7A02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.61 | 38.0 | 3.60e-01 | 81.5% | 51.9% |
| 1lc5A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.61 | 38.0 | 3.66e-01 | 81.5% | 54.4% |
| 5ih0A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.59 | 38.0 | 4.03e-01 | 82.4% | 75.3% |
| 4q5eA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.59 | 37.0 | 4.29e-01 | 82.4% | 92.0% |
| 4lrjA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.58 | 36.0 | 4.22e-01 | 83.3% | 91.8% |
| 3ffhA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.58 | 36.0 | 3.39e-01 | 81.5% | 50.0% |
| 3fkdA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.58 | 37.0 | 3.72e-01 | 81.5% | 62.5% |
| 3hdoA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.58 | 36.0 | 3.41e-01 | 82.4% | 51.5% |
| 1wqsA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.57 | 32.0 | 3.82e-01 | 86.1% | 82.9% |
| 3havA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.57 | 35.0 | 3.83e-01 | 82.4% | 74.2% |
| 4w8iA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.57 | 38.0 | 3.71e-01 | 83.3% | 61.2% |
| 6ctzA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 37.0 | 3.91e-01 | 84.3% | 76.3% |
| 2kilA00 | 3.90.1520.10 | Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain | 0.56 | 42.0 | 3.53e-01 | 78.7% | 50.3% |
| 5iqaA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 35.0 | 3.84e-01 | 82.4% | 77.8% |
| 3lzhA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 36.0 | 3.84e-01 | 82.4% | 78.0% |
| 2qggA01 | 2.40.30.60 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM | 0.54 | 34.0 | 3.61e-01 | 70.4% | 72.0% |
| 2dm7A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 29.0 | 3.18e-01 | 71.3% | 63.6% |
| 4emeA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.52 | 42.0 | 3.07e-01 | 89.8% | 98.5% |
| 8e7cA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.51 | 36.0 | 4.02e-01 | 83.3% | 96.3% |
| 1pfoA02 | 3.30.1040.20 | Alpha Beta › 2-Layer Sandwich › Carboxypeptidase Inhibitor; Chain A › | 0.51 | 22.0 | 2.83e-01 | 91.7% | 69.8% |
| 5iryA05 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.51 | 28.0 | 3.12e-01 | 71.3% | 67.1% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3270632 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.83 | 57.0 | 4.67e-01 | 82.4% | 40.4% |
| 4071991 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.83 | 56.0 | 4.60e-01 | 81.5% | 40.5% |
| 3824583 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.83 | 57.0 | 4.61e-01 | 81.5% | 40.0% |
| 4137468 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.82 | 56.0 | 4.61e-01 | 81.5% | 41.1% |
| 2597170 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.82 | 56.0 | 4.59e-01 | 81.5% | 41.1% |
| 3518051 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.81 | 58.0 | 4.70e-01 | 81.5% | 41.6% |
| 3246273 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.81 | 57.0 | 4.60e-01 | 82.4% | 40.0% |
| 3394861 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.81 | 56.0 | 4.49e-01 | 80.6% | 39.0% |
| 3609850 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.81 | 55.0 | 4.38e-01 | 78.7% | 36.6% |
| 4447311 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.81 | 56.0 | 4.61e-01 | 81.5% | 42.2% |
| 3648733 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.81 | 56.0 | 4.37e-01 | 81.5% | 36.2% |
| 4094836 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.81 | 54.0 | 4.51e-01 | 80.6% | 41.1% |
| 3595902 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.81 | 55.0 | 4.40e-01 | 78.7% | 37.5% |
| 3961786 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.80 | 55.0 | 4.54e-01 | 81.5% | 41.1% |
| 4112673 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.80 | 56.0 | 4.63e-01 | 81.5% | 43.3% |
| 4203622 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.80 | 55.0 | 4.61e-01 | 82.4% | 43.4% |
| 4235299 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.80 | 56.0 | 4.58e-01 | 81.5% | 41.8% |
| 4567824 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.79 | 56.0 | 4.47e-01 | 81.5% | 40.0% |
| 4460746 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.79 | 55.0 | 4.56e-01 | 82.4% | 42.8% |
| 4138504 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.78 | 54.0 | 4.43e-01 | 81.5% | 41.1% |
| 3742303 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.78 | 58.0 | 4.71e-01 | 83.3% | 43.3% |
| 4362035 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.78 | 54.0 | 4.47e-01 | 82.4% | 41.6% |
| 4025741 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.78 | 55.0 | 4.59e-01 | 83.3% | 43.9% |
| 4263825 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.76 | 59.0 | 4.75e-01 | 84.3% | 45.3% |
| 4460268 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.76 | 54.0 | 4.43e-01 | 81.5% | 42.1% |
| 3200626 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.74 | 58.0 | 4.64e-01 | 82.4% | 45.5% |
| 4962382 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.73 | 45.0 | 4.54e-01 | 79.6% | 60.9% |
| 4931854 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.73 | 44.0 | 4.20e-01 | 75.0% | 52.0% |
| 2471294 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.73 | 50.0 | 4.03e-01 | 79.6% | 37.3% |
| 3730019 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.73 | 57.0 | 4.40e-01 | 81.5% | 50.0% |
| 5070603 | 2006.1.1.7 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › S6PP | 0.64 | 45.0 | 3.35e-01 | 81.5% | 29.4% |
| 5047257 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.64 | 44.0 | 4.07e-01 | 80.6% | 55.0% |
| 3599841 | 304.132.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in 2,3-bisphosphoglycerate-independent phosphoglycerate mutase › ferredoxin-like domain in 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | 0.58 | 43.0 | 3.75e-01 | 79.6% | 98.8% |
| 3984011 | 206.1.1.33 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › OspG_kinase | 0.57 | 37.0 | 3.14e-01 | 83.3% | 40.0% |
| 4229831 | 3513.1.1.2 ↗ | a+b two layers › Putative lipoprotein LppA › Putative lipoprotein LppA › Putative lipoprotein LppA › LppA | 0.56 | 41.0 | 3.62e-01 | 78.7% | 75.2% |
| 4431701 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.55 | 35.0 | 3.67e-01 | 70.4% | 70.5% |
| 3548297 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.55 | 35.0 | 2.49e-01 | 83.3% | 20.4% |
| 3596185 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.53 | 36.0 | 2.69e-01 | 83.3% | 27.4% |
| 4964823 | 101.1.2.929 ↗ | alpha arrays › HTH › HTH › winged helix domain › HVO_2833_C | 0.50 | 40.0 | 3.21e-01 | 88.0% | 96.5% |