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S27_BME27_1069154_prodigal-single.1__X__X__00067

Bact-Vir

S27_BME27_1069154_prodigal-single.1__X__X__00067

Identity

Kingdom:
phage

Quality

88.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-71
PDB
Domain cluster: representative
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ftxB01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.75 58.0 4.71e-01 82.9% 50.8%
4q28A00 3.30.160.780 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.73 56.0 4.82e-01 82.9% 99.1%
1qw2A00 3.30.1980.10 Alpha Beta › 2-Layer Sandwich › Hypothetical protein Ta1206 fold › Hypothetical protein YunC 0.72 56.0 4.94e-01 84.3% 94.1%
3nvqA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.69 53.0 3.27e-01 84.3% 31.5%
2l2nA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.69 49.0 4.94e-01 75.7% 97.2%
4h5bA00 3.30.1460.70 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.69 60.0 4.73e-01 100.0% 79.6%
1v58A01 3.10.450.70 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Disulphide bond isomerase, DsbC/G, N-terminal 0.68 41.0 4.16e-01 74.3% 60.6%
1s4uX00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.65 54.0 3.40e-01 90.0% 26.1%
6heiA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.64 48.0 3.07e-01 97.1% 16.8%
2ltrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.64 49.0 4.31e-01 84.3% 79.0%
2nugB02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.64 44.0 4.47e-01 74.3% 93.0%
2bs6A01 2.40.128.190 Mainly Beta › Beta Barrel › Lipocalin › 0.63 47.0 4.47e-01 80.0% 94.0%
2f20A00 3.90.1680.10 Alpha Beta › Alpha-Beta Complex › hypothetical protein yedk fold › SOS response associated peptidase-like 0.63 45.0 3.14e-01 75.7% 98.7%
2hzmA02 2.20.140.20 Mainly Beta › Single Sheet › q64v53_bacfr protein fold › 0.62 56.0 5.21e-01 97.1% 91.8%
3cm1A00 2.30.31.20 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB 0.61 54.0 4.35e-01 100.0% 75.7%
7oufB01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.60 45.0 3.56e-01 81.4% 82.6%
1imuA00 3.30.160.100 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like 0.59 45.0 4.08e-01 87.1% 81.3%
8hpoK01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 43.0 2.71e-01 80.0% 34.0%
1e2tA03 2.40.128.150 Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases 0.58 45.0 3.87e-01 85.7% 73.5%
6jptA00 3.30.230.90 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.58 52.0 4.34e-01 100.0% 87.6%
3wirA03 2.60.420.10 Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 0.58 38.0 3.85e-01 82.9% 68.1%
3o9zD02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.58 40.0 2.99e-01 72.9% 63.1%
4csdB00 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.57 49.0 3.35e-01 97.1% 39.0%
1e5tA02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.57 48.0 3.17e-01 100.0% 45.3%
3a7sA00 3.40.532.10 Alpha Beta › 3-Layer(aba) Sandwich › Ubiquitin C-terminal Hydrolase UCH-l3 › Peptidase C12, ubiquitin carboxyl-terminal hydrolase 0.57 50.0 3.58e-01 97.1% 76.0%
4n4bA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.56 48.0 3.19e-01 100.0% 78.7%
7ne4A01 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.56 45.0 3.04e-01 95.7% 89.4%
4bndA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.56 44.0 3.49e-01 88.6% 83.3%
4ozuA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 48.0 3.09e-01 98.6% 28.0%
2wdtC02 3.30.1490.420 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ubiquitin carboxyl-terminal hydrolase, domain 2 0.56 46.0 4.15e-01 94.3% 74.3%
3qitB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.56 44.0 2.87e-01 84.3% 40.3%
3mx7A00 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.55 48.0 4.44e-01 97.1% 88.9%
4chjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 38.0 3.30e-01 75.7% 61.3%
6v55A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 46.0 3.43e-01 97.1% 72.8%
1pzxA03 3.30.1180.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › 0.53 40.0 3.41e-01 82.9% 75.4%
2pmaA01 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.53 39.0 3.33e-01 80.0% 95.9%
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.53 45.0 3.83e-01 97.1% 90.8%
1d5aA01 3.30.342.10 Alpha Beta › 2-Layer Sandwich › DNA Polymerase; Chain A, domain 1 › DNA Polymerase, chain B, domain 1 0.53 40.0 3.13e-01 81.4% 94.0%
5fgoA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 42.0 4.46e-01 90.0% 100.0%
4chmB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 45.0 3.79e-01 97.1% 69.4%
6i8wB01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.52 42.0 2.72e-01 85.7% 37.1%
2gfoA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.52 44.0 2.91e-01 98.6% 64.3%
2qm4A01 2.170.210.10 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal 0.51 43.0 3.47e-01 95.7% 72.7%
3zx7A02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.51 38.0 3.22e-01 84.3% 85.4%
3rf9B02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.51 44.0 2.98e-01 100.0% 94.4%
4opmA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 39.0 2.57e-01 84.3% 38.1%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.50 36.0 3.73e-01 92.9% 83.1%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5067470 850.1.1.0 ↗ a+b three layers › Hypothetical protein Ta1206-like › Hypothetical protein Ta1206-like › Hypothetical protein Ta1206-like 0.77 58.0 5.21e-01 80.0% 98.9%
5001720 850.1.1.2 ↗ a+b three layers › Hypothetical protein Ta1206-like › Hypothetical protein Ta1206-like › Hypothetical protein Ta1206-like › DUF1805 0.76 57.0 5.16e-01 80.0% 98.9%
4948662 850.1.1.2 ↗ a+b three layers › Hypothetical protein Ta1206-like › Hypothetical protein Ta1206-like › Hypothetical protein Ta1206-like › DUF1805 0.76 57.0 5.06e-01 80.0% 94.9%
4951537 850.1.1.2 ↗ a+b three layers › Hypothetical protein Ta1206-like › Hypothetical protein Ta1206-like › Hypothetical protein Ta1206-like › DUF1805 0.75 57.0 5.01e-01 80.0% 100.0%
3786329 386.1.1.1 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.74 52.0 5.73e-01 85.7% 92.7%
4297807 850.1.1.2 ↗ a+b three layers › Hypothetical protein Ta1206-like › Hypothetical protein Ta1206-like › Hypothetical protein Ta1206-like › DUF1805 0.74 58.0 5.10e-01 82.9% 98.0%
3592335 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.74 50.0 3.12e-01 70.0% 22.3%
7038 850.1.1.2 ↗ a+b three layers › Hypothetical protein Ta1206-like › Hypothetical protein Ta1206-like › Hypothetical protein Ta1206-like › DUF1805 0.72 56.0 4.94e-01 84.3% 94.1%
3177736 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.71 56.0 3.32e-01 84.3% 19.2%
3852280 5.1.4.8 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.69 49.0 3.20e-01 74.3% 24.9%
3968112 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.69 54.0 4.21e-01 85.7% 41.6%
3786102 4026.1.1.2 ↗ a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › Bud3_N 0.68 60.0 4.45e-01 100.0% 55.8%
4027492 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.68 49.0 3.26e-01 75.7% 41.1%
5013176 4100.1.1.0 ↗ a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.68 58.0 5.74e-01 97.1% 88.0%
5036255 241.1.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone 0.68 54.0 4.60e-01 87.1% 83.5%
3279607 9.3.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like 0.66 58.0 5.17e-01 98.6% 92.0%
4937593 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.66 58.0 4.06e-01 97.1% 72.9%
3233815 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.65 48.0 3.25e-01 95.7% 21.7%
3596085 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.65 48.0 4.63e-01 80.0% 86.3%
3710203 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.65 45.0 2.75e-01 72.9% 96.6%
4988831 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.65 41.0 4.60e-01 75.7% 83.6%
3990496 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.65 50.0 5.04e-01 81.4% 84.3%
4883226 5.1.3.21 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Fungal_lectin 0.64 48.0 4.37e-01 100.0% 60.2%
5060431 2004.1.1.198 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.63 57.0 3.55e-01 100.0% 63.4%
4031638 7089.1.1.1 ↗ a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › DUF1108 0.63 55.0 5.22e-01 100.0% 96.5%
3245311 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.62 47.0 4.19e-01 94.3% 55.2%
3929256 295.1.1.3 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.61 53.0 4.25e-01 97.1% 85.7%
5054272 2004.1.1.198 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.61 55.0 3.21e-01 100.0% 76.7%
3955040 3844.2.1.1 ↗ a+b two layers › hydrogenase expression protein-like › MybT EspG5 chaperone › MybT EspG5 chaperone › ESX-1_EspG 0.61 54.0 3.62e-01 100.0% 56.0%
3510850 3459.1.1.0 ↗ beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule 0.61 52.0 4.79e-01 95.7% 94.4%
4003966 5.1.1.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed 0.61 47.0 3.52e-01 82.9% 51.8%
3714612 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.60 46.0 3.56e-01 82.9% 41.2%
3283450 3844.2.1.1 ↗ a+b two layers › hydrogenase expression protein-like › MybT EspG5 chaperone › MybT EspG5 chaperone › ESX-1_EspG 0.60 53.0 3.63e-01 100.0% 54.2%
3454685 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.60 52.0 3.35e-01 98.6% 51.3%
3287961 3844.2.1.1 ↗ a+b two layers › hydrogenase expression protein-like › MybT EspG5 chaperone › MybT EspG5 chaperone › ESX-1_EspG 0.60 53.0 3.57e-01 100.0% 53.6%
5034929 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.59 54.0 3.76e-01 100.0% 60.7%
4954334 298.2.1.0 ↗ a+b two layers › FwdE/GAPDH domain-like › FwdE-like › FwdE-like 0.59 51.0 4.04e-01 94.3% 73.6%
3228995 2484.1.1.200 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH 0.59 46.0 2.71e-01 84.3% 55.0%
5029671 3504.3.1.1 ↗ beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N 0.58 49.0 3.80e-01 94.3% 87.5%
3467789 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.58 51.0 3.30e-01 98.6% 33.5%
3839291 300.1.1.8 ↗ a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 0.58 41.0 2.81e-01 74.3% 45.2%
3442715 5.1.3.144 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like 0.58 48.0 3.24e-01 98.6% 58.7%
3553623 719.1.1.2 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XLF 0.57 43.0 3.67e-01 84.3% 76.8%
4947399 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 48.0 4.43e-01 100.0% 81.1%
4262159 2004.1.1.308 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 0.57 50.0 3.20e-01 100.0% 28.4%
3867103 3417.1.1.1 ↗ a+b three layers › Surfactant protein C BRICHOS domain › Surfactant protein C BRICHOS domain › Surfactant protein C BRICHOS domain › BRICHOS 0.57 43.0 3.76e-01 81.4% 54.3%
3922315 219.1.1.9 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C12 0.56 47.0 3.09e-01 94.3% 62.0%
3721353 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 47.0 3.09e-01 98.6% 46.0%
3485287 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.56 47.0 3.49e-01 98.6% 62.4%
4013508 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.56 47.0 3.06e-01 95.7% 37.1%
4631877 5.1.4.219 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DPPIV_N 0.55 45.0 2.81e-01 98.6% 31.5%
185415 3459.1.1.1 ↗ beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › FAIM1 0.55 48.0 4.44e-01 97.1% 88.9%
1283866 220.1.1.51 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › ISP3_C 0.55 38.0 3.30e-01 75.7% 61.3%
3391728 3459.1.1.1 ↗ beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › FAIM1 0.55 47.0 4.48e-01 95.7% 94.0%
3998402 4184.1.1.2 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b 0.54 37.0 3.43e-01 71.4% 54.3%
3881671 719.1.1.2 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XLF 0.54 41.0 3.55e-01 84.3% 80.8%
3247609 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.54 37.0 2.41e-01 71.4% 80.9%
3230771 4184.1.1.2 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b 0.53 35.0 3.31e-01 75.7% 52.2%
3767960 719.1.1.2 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XLF 0.53 44.0 3.73e-01 95.7% 87.2%
3622643 4184.1.1.2 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b 0.53 35.0 3.33e-01 75.7% 55.3%
3643227 220.1.1.36 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_12 0.52 42.0 3.35e-01 100.0% 42.7%
5064574 3604.1.1.1 ↗ a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion 0.51 35.0 3.69e-01 71.4% 96.7%