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S27_BME27_1069154_prodigal-single.1__X__X__00127
Bact-VirS27_BME27_1069154_prodigal-single.1__X__X__00127
Identity
- Kingdom:
- phage
Quality
86.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-86
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1g1bA00 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.58 | 46.0 | 3.66e-01 | 87.3% | 87.2% |
| 3nbiA02 | 2.40.50.770 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RecQ-mediated genome instability protein Rmi1, C-terminal domain | 0.55 | 44.0 | 3.66e-01 | 84.8% | 75.6% |
| 3f6gA01 | 3.30.160.740 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 34.0 | 3.85e-01 | 97.5% | 84.5% |
| 2chrA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.52 | 36.0 | 3.10e-01 | 72.2% | 78.0% |
| 4dduA07 | 2.60.510.20 | Mainly Beta › Sandwich › EV matrix protein fold › | 0.51 | 46.0 | 4.12e-01 | 97.5% | 74.8% |
| 3loyA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 42.0 | 3.90e-01 | 97.5% | 71.3% |
| 1ksiA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 41.0 | 3.84e-01 | 97.5% | 71.9% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3271234 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 39.0 | 4.86e-01 | 98.7% | 97.8% |
| 4153471 | 814.1.1.2 ↗ | a+b two layers › Chorismate lyase › Chorismate lyase › Chorismate lyase › Chor_lyase | 0.65 | 54.0 | 4.27e-01 | 94.9% | 82.9% |
| 4659121 | 814.1.1.2 ↗ | a+b two layers › Chorismate lyase › Chorismate lyase › Chorismate lyase › Chor_lyase | 0.64 | 54.0 | 4.21e-01 | 94.9% | 81.0% |
| 4069356 | 814.1.1.2 ↗ | a+b two layers › Chorismate lyase › Chorismate lyase › Chorismate lyase › Chor_lyase | 0.64 | 54.0 | 4.21e-01 | 94.9% | 82.9% |
| 3281271 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.63 | 44.0 | 4.23e-01 | 100.0% | 63.3% |
| 5008413 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 49.0 | 4.39e-01 | 83.5% | 89.1% |
| 3713569 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 50.0 | 4.28e-01 | 100.0% | 55.4% |
| 3678525 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.59 | 41.0 | 3.44e-01 | 73.4% | 51.0% |
| 3967986 | 4.7.1.2 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › ROF | 0.58 | 41.0 | 4.12e-01 | 100.0% | 73.8% |
| 4251626 | 2.1.1.171 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Tea_C | 0.58 | 43.0 | 3.57e-01 | 83.5% | 45.9% |
| 4015745 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 39.0 | 2.55e-01 | 72.2% | 96.3% |
| 3974807 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.55 | 41.0 | 3.50e-01 | 84.8% | 49.6% |
| 3963855 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.54 | 42.0 | 3.08e-01 | 84.8% | 58.5% |
| 3197818 | 295.1.1.30 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › Cyto_heme_lyase | 0.54 | 46.0 | 3.72e-01 | 97.5% | 91.4% |
| 4980439 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.54 | 39.0 | 2.94e-01 | 75.9% | 91.1% |
| 5009871 | 2005.1.1.14 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct | 0.53 | 39.0 | 2.92e-01 | 79.7% | 79.0% |
| 4933605 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 36.0 | 3.99e-01 | 94.9% | 94.9% |
| 3689577 | 3497.1.1.0 ↗ | beta barrels › Replication foci-targeting sequence N-terminal domain › Replication foci-targeting sequence N-terminal domain › Replication foci-targeting sequence N-terminal domain | 0.52 | 43.0 | 3.53e-01 | 89.9% | 90.3% |
| 4457615 | 814.1.1.0 ↗ | a+b two layers › Chorismate lyase › Chorismate lyase › Chorismate lyase | 0.52 | 40.0 | 3.37e-01 | 86.1% | 77.9% |
| 3602836 | 284.1.3.6 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › DUF749 | 0.52 | 36.0 | 3.43e-01 | 74.7% | 71.0% |
| 3725938 | 277.1.1.0 ↗ | a+b two layers › PX domain › PX domain › PX domain | 0.52 | 38.0 | 3.11e-01 | 77.2% | 80.7% |
| 5072273 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 43.0 | 3.76e-01 | 100.0% | 60.8% |
| 3193145 | 2003.1.2.29 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 | 0.51 | 44.0 | 2.82e-01 | 98.7% | 47.6% |
| 5029496 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.51 | 36.0 | 3.12e-01 | 74.7% | 66.7% |