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S27_BME27_1069154_prodigal-single.1__X__X__00296
Bact-VirS27_BME27_1069154_prodigal-single.1__X__X__00296
Identity
- Kingdom:
- phage
Quality
56.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-82
Domain cluster:
rep: DGJ7_scaffold_2_2069_prodigal-single.1__X__X__00096__D27-76
D2
medium
residues 104-267
D3
medium
residues 268-344_480-508
D4
medium
residues 509-528_547-672
D5
medium
residues 673-749
D6
medium
residues 1058-1126
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vsvA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.81 | 70.0 | 4.11e-01 | 100.0% | 12.7% |
| 6kqsA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.79 | 71.0 | 4.31e-01 | 100.0% | 16.1% |
| 4oj5C04 | 2.160.20.130 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.75 | 64.0 | 4.58e-01 | 100.0% | 34.1% |
| 4zyaB00 | 3.30.1910.20 | Alpha Beta › 2-Layer Sandwich › so0334 like fold › asparaginyl-tRNA synthetase, N-terminal domain | 0.72 | 57.0 | 5.57e-01 | 84.1% | 88.2% |
| 2kqrA01 | 3.30.1910.20 | Alpha Beta › 2-Layer Sandwich › so0334 like fold › asparaginyl-tRNA synthetase, N-terminal domain | 0.68 | 52.0 | 5.07e-01 | 81.2% | 83.8% |
| 2hc9A01 | 3.40.50.10590 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Zn-dependent exopeptidases | 0.67 | 60.0 | 4.63e-01 | 100.0% | 85.7% |
| 1lziA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.62 | 46.0 | 3.19e-01 | 100.0% | 21.6% |
| 2xveA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.62 | 40.0 | 3.59e-01 | 100.0% | 46.0% |
| 1omzB00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.61 | 47.0 | 3.21e-01 | 100.0% | 22.7% |
| 3rhzA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.61 | 37.0 | 2.89e-01 | 100.0% | 26.1% |
| 2jbmA02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.60 | 42.0 | 3.32e-01 | 100.0% | 34.9% |
| 6kv9A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 50.0 | 3.66e-01 | 100.0% | 50.8% |
| 2px7A00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.57 | 41.0 | 3.03e-01 | 100.0% | 26.6% |
| 4ha7B00 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.57 | 38.0 | 2.79e-01 | 100.0% | 23.4% |
| 5ji5A00 | 3.40.800.20 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain | 0.57 | 47.0 | 3.21e-01 | 100.0% | 41.6% |
| 4i3gA01 | 3.20.20.300 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase, family 3, N-terminal domain | 0.56 | 47.0 | 3.08e-01 | 100.0% | 26.6% |
| 1ii7B02 | 3.30.110.80 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › DNA double-strand break repair nuclease | 0.56 | 48.0 | 4.62e-01 | 100.0% | 89.2% |
| 3n75A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 49.0 | 4.00e-01 | 100.0% | 61.2% |
| 3rh0A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 49.0 | 4.04e-01 | 100.0% | 75.0% |
| 1jvbA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 47.0 | 3.82e-01 | 100.0% | 68.8% |
| 4ogzA02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 45.0 | 3.10e-01 | 100.0% | 25.2% |
| 3wg9A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 48.0 | 3.81e-01 | 100.0% | 65.0% |
| 1f8fA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 44.0 | 3.63e-01 | 100.0% | 88.3% |
| 3sxuB00 | 3.40.50.10220 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › DNA polymerase III, psi subunit | 0.51 | 43.0 | 3.85e-01 | 100.0% | 65.7% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4284103 | 207.2.1.33 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pel9A-like_beta_helix | 0.81 | 72.0 | 4.28e-01 | 98.6% | 15.2% |
| 1841000 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.80 | 70.0 | 6.82e-01 | 100.0% | 86.7% |
| 3261847 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.80 | 73.0 | 4.65e-01 | 100.0% | 22.4% |
| 4969980 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.80 | 63.0 | 3.58e-01 | 100.0% | 8.7% |
| 4970042 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.80 | 62.0 | 3.55e-01 | 100.0% | 8.7% |
| 3263728 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.79 | 73.0 | 4.92e-01 | 100.0% | 29.8% |
| 2464818 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.79 | 72.0 | 6.52e-01 | 100.0% | 89.1% |
| 3272942 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.79 | 73.0 | 4.13e-01 | 100.0% | 10.6% |
| 4954461 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.79 | 72.0 | 4.60e-01 | 100.0% | 22.9% |
| 2831959 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.79 | 72.0 | 4.14e-01 | 100.0% | 12.1% |
| 5046331 | 207.2.1.33 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pel9A-like_beta_helix | 0.78 | 69.0 | 4.14e-01 | 100.0% | 15.7% |
| 5034990 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.78 | 61.0 | 3.80e-01 | 100.0% | 15.5% |
| 3287945 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.76 | 65.0 | 3.81e-01 | 100.0% | 12.5% |
| 3256985 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.76 | 67.0 | 4.00e-01 | 100.0% | 14.0% |
| 5034599 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.76 | 60.0 | 3.73e-01 | 100.0% | 15.9% |
| 4954462 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.75 | 68.0 | 4.12e-01 | 100.0% | 16.6% |
| 4417687 | 7516.1.1.102 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2, Glyco_trans_2_3 | 0.72 | 51.0 | 3.06e-01 | 100.0% | 11.3% |
| 3800826 | 1089.1.1.0 ↗ | a+b two layers › Asparaginal-tRNA synthetase N-terminal domain › Asparaginal-tRNA synthetase N-terminal domain › Asparaginal-tRNA synthetase N-terminal domain | 0.71 | 54.0 | 5.46e-01 | 81.2% | 88.6% |
| 3221312 | 1089.1.1.1 ↗ | a+b two layers › Asparaginal-tRNA synthetase N-terminal domain › Asparaginal-tRNA synthetase N-terminal domain › Asparaginal-tRNA synthetase N-terminal domain › AsnRS_N | 0.70 | 54.0 | 5.26e-01 | 81.2% | 82.7% |
| 3619499 | 7516.1.1.21 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_64 | 0.68 | 51.0 | 3.45e-01 | 100.0% | 22.0% |
| 119233 | 1089.1.1.1 ↗ | a+b two layers › Asparaginal-tRNA synthetase N-terminal domain › Asparaginal-tRNA synthetase N-terminal domain › Asparaginal-tRNA synthetase N-terminal domain › AsnRS_N | 0.68 | 52.0 | 4.36e-01 | 81.2% | 55.9% |
| 3654075 | 7516.1.1.21 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_64 | 0.67 | 49.0 | 3.28e-01 | 100.0% | 20.4% |
| 4338633 | 7516.1.1.17 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_6 | 0.66 | 51.0 | 3.42e-01 | 100.0% | 21.2% |
| 3699914 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.66 | 42.0 | 3.68e-01 | 91.3% | 42.9% |
| 3164506 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.65 | 47.0 | 3.14e-01 | 100.0% | 18.6% |
| 3594633 | 7516.1.1.0 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases | 0.64 | 49.0 | 3.50e-01 | 100.0% | 26.2% |
| 4934334 | 3979.1.1.0 ↗ | a+b four layers › Mre11 nuclease C-terminal domain › Mre11 nuclease C-terminal domain › Mre11 nuclease C-terminal domain | 0.62 | 49.0 | 5.21e-01 | 100.0% | 98.3% |
| 3897091 | 7516.1.1.17 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_6 | 0.62 | 47.0 | 3.15e-01 | 100.0% | 19.7% |
| 3759239 | 7516.1.1.17 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_6 | 0.61 | 46.0 | 3.14e-01 | 100.0% | 21.1% |
| 3675399 | 7516.1.1.21 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_64 | 0.61 | 44.0 | 3.01e-01 | 100.0% | 20.4% |
| 3547198 | 7516.1.1.17 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_6 | 0.60 | 45.0 | 2.98e-01 | 100.0% | 17.3% |
| 4928728 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.57 | 45.0 | 3.55e-01 | 100.0% | 40.7% |
| 3641910 | 2487.1.1.7 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › PA | 0.55 | 38.0 | 3.14e-01 | 100.0% | 38.5% |
| 4241928 | 3979.1.1.1 ↗ | a+b four layers › Mre11 nuclease C-terminal domain › Mre11 nuclease C-terminal domain › Mre11 nuclease C-terminal domain › Mre11_DNA_bind | 0.55 | 48.0 | 4.64e-01 | 100.0% | 97.5% |
| 4147569 | 2007.1.3.16 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › KaiA_N | 0.53 | 45.0 | 3.71e-01 | 100.0% | 54.3% |
D7
medium
residues 1127-1227