←Back to structures
S27_BME27_1069154_prodigal-single.1__X__X__00298
Bact-VirS27_BME27_1069154_prodigal-single.1__X__X__00298
Identity
- Kingdom:
- phage
Quality
58.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 17-126
Domain cluster:
rep: OV032902.1__CAH0447963.1__SM033_00139__00139__D168-264
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6o38A02 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 53.0 | 5.75e-01 | 86.4% | 96.7% |
| 6o38A04 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.69 | 51.0 | 5.62e-01 | 89.1% | 96.6% |
| 6o38A03 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 44.0 | 4.87e-01 | 79.1% | 100.0% |
| 3oloA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.59 | 29.0 | 2.93e-01 | 79.1% | 45.9% |
| 3eqnA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.58 | 48.0 | 3.47e-01 | 92.7% | 33.9% |
| 2kr7A02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.56 | 24.0 | 3.11e-01 | 76.4% | 70.2% |
| 1dabA00 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.56 | 47.0 | 3.07e-01 | 94.5% | 24.9% |
| 1k4zA00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.55 | 40.0 | 3.64e-01 | 87.3% | 54.8% |
| 1hf2A02 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.55 | 43.0 | 4.42e-01 | 93.6% | 87.7% |
| 4nzrM02 | 2.160.20.180 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.54 | 44.0 | 3.71e-01 | 90.0% | 51.6% |
| 5i7pA02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.54 | 23.0 | 3.12e-01 | 77.3% | 81.2% |
| 6mv2A03 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.52 | 36.0 | 3.36e-01 | 75.5% | 57.8% |
| 4f2eA00 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.51 | 36.0 | 3.76e-01 | 72.7% | 82.7% |
| 5tk2B00 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.51 | 37.0 | 4.11e-01 | 87.3% | 96.6% |
| 3ak5D02 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.50 | 42.0 | 2.61e-01 | 91.8% | 14.8% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3942383 | 520.2.1.0 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE | 0.92 | 73.0 | 8.12e-01 | 90.9% | 100.0% |
| 2581338 | 520.2.1.1 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich | 0.69 | 54.0 | 5.72e-01 | 87.3% | 95.8% |
| 2526446 | 1160.1.1.1 ↗ | beta duplicates or obligate multimers › Endoglin orphan region (OR) domain › Endoglin orphan region (OR) domain › Endoglin orphan region (OR) domain › TGFBR3_N | 0.65 | 43.0 | 3.71e-01 | 72.7% | 43.5% |
| 2581339 | 520.2.1.1 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich | 0.65 | 50.0 | 5.32e-01 | 89.1% | 96.8% |
| 4394964 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.58 | 48.0 | 3.74e-01 | 91.8% | 78.0% |
| 3192322 | 207.2.1.20 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 | 0.58 | 48.0 | 3.38e-01 | 92.7% | 28.6% |
| 4461157 | 1160.1.1.1 ↗ | beta duplicates or obligate multimers › Endoglin orphan region (OR) domain › Endoglin orphan region (OR) domain › Endoglin orphan region (OR) domain › TGFBR3_N | 0.57 | 40.0 | 3.53e-01 | 74.5% | 49.4% |
| 4667612 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.56 | 49.0 | 3.78e-01 | 100.0% | 75.8% |
| 3985721 | 207.2.1.78 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pertactin, AIDA | 0.55 | 47.0 | 3.04e-01 | 93.6% | 20.2% |
| 4540273 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.55 | 46.0 | 3.62e-01 | 92.7% | 78.0% |
| 2156967 | 207.5.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C | 0.53 | 44.0 | 4.40e-01 | 90.0% | 92.8% |
| 4332884 | 207.2.1.78 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pertactin, AIDA | 0.53 | 45.0 | 3.34e-01 | 93.6% | 39.7% |
| 3987739 | 207.4.1.6 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › CFSR | 0.53 | 45.0 | 3.51e-01 | 93.6% | 46.7% |
| 4256807 | 207.2.1.10 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pertactin | 0.53 | 44.0 | 3.75e-01 | 93.6% | 65.3% |
| 4651440 | 207.5.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C | 0.52 | 42.0 | 4.29e-01 | 93.6% | 88.2% |
| 3634222 | 207.4.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › CAP_C | 0.52 | 41.0 | 3.66e-01 | 92.7% | 57.5% |
| 5040472 | 3156.1.1.0 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related | 0.52 | 32.0 | 3.63e-01 | 88.2% | 83.7% |
| 4475590 | 207.5.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C | 0.52 | 41.0 | 4.18e-01 | 86.4% | 94.3% |
| 4210922 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.52 | 45.0 | 3.48e-01 | 100.0% | 69.6% |
| 4183596 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.51 | 44.0 | 3.47e-01 | 99.1% | 76.5% |
| 4512437 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.51 | 44.0 | 3.45e-01 | 99.1% | 70.0% |
| 5033306 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.51 | 33.0 | 3.16e-01 | 92.7% | 53.3% |
| 4419821 | 207.5.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C | 0.51 | 42.0 | 4.22e-01 | 93.6% | 87.8% |
| 4131560 | 207.5.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C | 0.51 | 43.0 | 4.22e-01 | 93.6% | 88.3% |
| 4143020 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.51 | 43.0 | 3.37e-01 | 99.1% | 78.5% |
| 4041561 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.50 | 43.0 | 3.42e-01 | 99.1% | 71.8% |
| 3936696 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.50 | 40.0 | 3.06e-01 | 90.0% | 36.2% |
D2
medium
residues 211-280
D3
medium
residues 377-440