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S27_BME27_1069154_prodigal-single.1__X__X__00299
Bact-VirS27_BME27_1069154_prodigal-single.1__X__X__00299
Identity
- Kingdom:
- phage
Quality
51.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 30-118
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6o38A02 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.69 | 61.0 | 6.12e-01 | 98.9% | 96.7% |
| 6o38A04 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 58.0 | 5.86e-01 | 100.0% | 94.4% |
| 4dnyA00 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 57.0 | 5.39e-01 | 100.0% | 87.2% |
| 1a65A01 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.65 | 49.0 | 4.27e-01 | 79.8% | 75.8% |
| 6o38A01 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 56.0 | 5.55e-01 | 98.9% | 98.9% |
| 6xizA02 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.62 | 48.0 | 3.97e-01 | 83.1% | 65.8% |
| 6o38A03 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 49.0 | 5.09e-01 | 94.4% | 100.0% |
| 5tk2B00 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.60 | 42.0 | 4.25e-01 | 74.2% | 73.9% |
| 3e4cB00 | 3.40.50.1460 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 48.0 | 3.44e-01 | 92.1% | 82.5% |
| 2cuaB00 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.55 | 47.0 | 4.23e-01 | 97.8% | 75.0% |
| 1fwxA02 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.55 | 48.0 | 4.36e-01 | 97.8% | 73.6% |
| 1hf2A02 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.55 | 47.0 | 4.47e-01 | 98.9% | 91.5% |
| 4v02C00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.52 | 45.0 | 4.13e-01 | 100.0% | 83.6% |
| 1mdbA02 | 3.40.50.980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 43.0 | 3.49e-01 | 91.0% | 54.0% |
| 3qtgA03 | 3.40.1380.20 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain | 0.52 | 37.0 | 3.41e-01 | 74.2% | 70.4% |
| 1vypX00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 42.0 | 2.90e-01 | 93.3% | 40.3% |
| 5cw3C01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.52 | 40.0 | 3.43e-01 | 84.3% | 78.9% |
| 1ibyA00 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.51 | 45.0 | 4.18e-01 | 97.8% | 81.2% |
| 3bh7B01 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.51 | 44.0 | 3.52e-01 | 100.0% | 76.7% |
| 7chuA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.51 | 44.0 | 3.00e-01 | 100.0% | 39.2% |
| 6lydA01 | 3.40.470.10 | Alpha Beta › 3-Layer(aba) Sandwich › Uracil-DNA Glycosylase, subunit E › Uracil-DNA glycosylase-like domain | 0.51 | 40.0 | 3.01e-01 | 88.8% | 68.4% |
| 2yevB02 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.50 | 44.0 | 3.31e-01 | 97.8% | 42.0% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3942383 | 520.2.1.0 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE | 0.93 | 86.0 | 8.63e-01 | 100.0% | 95.6% |
| 2581340 | 520.2.1.1 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich | 0.67 | 57.0 | 5.76e-01 | 100.0% | 98.9% |
| 3599238 | 207.4.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like | 0.66 | 56.0 | 4.57e-01 | 100.0% | 49.4% |
| 2526446 | 1160.1.1.1 ↗ | beta duplicates or obligate multimers › Endoglin orphan region (OR) domain › Endoglin orphan region (OR) domain › Endoglin orphan region (OR) domain › TGFBR3_N | 0.65 | 49.0 | 3.94e-01 | 84.3% | 41.8% |
| 2581337 | 520.2.1.1 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich | 0.65 | 57.0 | 5.69e-01 | 100.0% | 98.9% |
| 4220155 | 2008.1.1.11 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › SfsA | 0.63 | 46.0 | 3.85e-01 | 77.5% | 75.5% |
| 3982197 | 207.2.1.25 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › AIDA | 0.62 | 51.0 | 3.32e-01 | 100.0% | 19.4% |
| 5057973 | 3156.1.1.13 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Cupredoxin_1 | 0.60 | 44.0 | 4.24e-01 | 76.4% | 69.0% |
| 3583965 | 3156.1.1.1 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › COX2 | 0.60 | 43.0 | 4.07e-01 | 76.4% | 75.5% |
| 4471739 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.59 | 51.0 | 3.74e-01 | 100.0% | 63.1% |
| 5044383 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.58 | 47.0 | 3.74e-01 | 88.8% | 88.1% |
| 3281086 | 207.4.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like | 0.57 | 46.0 | 3.91e-01 | 100.0% | 52.7% |
| 5056065 | 3156.1.1.0 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related | 0.56 | 41.0 | 3.97e-01 | 76.4% | 69.0% |
| 4116705 | 207.5.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C | 0.56 | 49.0 | 4.64e-01 | 100.0% | 95.4% |
| 2700331 | 3156.1.1.1 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › COX2 | 0.55 | 48.0 | 4.18e-01 | 97.8% | 78.1% |
| 4394964 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.55 | 47.0 | 3.51e-01 | 100.0% | 63.1% |
| 4475590 | 207.5.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C | 0.55 | 48.0 | 4.59e-01 | 100.0% | 94.3% |
| 7233 | 207.5.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C | 0.55 | 47.0 | 4.46e-01 | 98.9% | 90.7% |
| 2137580 | 3156.1.1.13 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Cupredoxin_1 | 0.55 | 45.0 | 4.40e-01 | 97.8% | 82.4% |
| 4663567 | 207.6.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › Ice_nucleation | 0.54 | 43.0 | 2.66e-01 | 100.0% | 13.2% |
| 3987739 | 207.4.1.6 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › CFSR | 0.54 | 47.0 | 3.53e-01 | 100.0% | 57.1% |
| 3306499 | 207.1.1.77 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FBD | 0.54 | 47.0 | 3.14e-01 | 100.0% | 31.1% |
| None | — | 0.54 | 47.0 | 3.09e-01 | 100.0% | 23.5% | |
| 4493843 | 207.5.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C | 0.54 | 47.0 | 4.48e-01 | 100.0% | 87.6% |
| 4179400 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.53 | 44.0 | 3.21e-01 | 97.8% | 47.1% |
| 2771100 | 3156.1.1.1 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › COX2 | 0.52 | 44.0 | 3.79e-01 | 97.8% | 57.1% |
| 4651440 | 207.5.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C | 0.52 | 45.0 | 4.27e-01 | 100.0% | 90.9% |
| 3863800 | 207.4.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › TBCC | 0.51 | 44.0 | 3.42e-01 | 100.0% | 61.9% |
D2
high
residues 390-466
Domain cluster:
rep: SR-VP_4-6_scaffold_141_2630357_prodigal-single.1__X__X__00381__D63-136