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S27_BME27_1069154_prodigal-single.1__X__X__00310
Bact-VirS27_BME27_1069154_prodigal-single.1__X__X__00310
Identity
- Kingdom:
- phage
Quality
87.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-143
Domain cluster:
rep: IMGVR_UViG_3300007985_000016-3300007985-Ga0100381_100023268__D6-113
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13638.13 best | PIN_4 | 107.3 | 1.00e-30 | 98.6% | 97.7% |
D2
medium
residues 151-242
Domain cluster:
representative
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3s9xA00 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.73 | 51.0 | 4.22e-01 | 72.8% | 99.4% |
| 1sgvA02 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.72 | 44.0 | 5.17e-01 | 79.3% | 90.5% |
| 2b78A01 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.67 | 46.0 | 5.23e-01 | 81.5% | 100.0% |
| 5dnoA00 | 3.10.590.10 | Alpha Beta › Roll › ph1033 like fold › ph1033 like domains | 0.66 | 55.0 | 4.50e-01 | 89.1% | 93.3% |
| 1t62B00 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.65 | 49.0 | 4.02e-01 | 79.3% | 81.0% |
| 3vseA01 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.63 | 45.0 | 5.07e-01 | 76.1% | 100.0% |
| 4dmgA01 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.63 | 46.0 | 5.03e-01 | 90.2% | 100.0% |
| 4rcjA01 | 3.10.590.10 | Alpha Beta › Roll › ph1033 like fold › ph1033 like domains | 0.63 | 50.0 | 4.30e-01 | 85.9% | 93.8% |
| 1k28D03 | 2.40.30.150 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 | 0.60 | 43.0 | 4.30e-01 | 75.0% | 98.9% |
| 3c0kA01 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.59 | 43.0 | 4.76e-01 | 80.4% | 100.0% |
| 2as0A01 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.59 | 42.0 | 4.66e-01 | 80.4% | 100.0% |
| 2apoA01 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.59 | 41.0 | 4.02e-01 | 71.7% | 89.9% |
| 1q7hA02 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.58 | 43.0 | 4.47e-01 | 79.3% | 97.7% |
| 3ib5A00 | 3.10.570.10 | Alpha Beta › Roll › sex pheromone staph- cam373 precursor fold › sex pheromone staph- cam373 precursor domain | 0.58 | 41.0 | 2.77e-01 | 72.8% | 43.0% |
| 2j5vA02 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.56 | 41.0 | 4.14e-01 | 79.3% | 100.0% |
| 2nwaA01 | 2.40.240.20 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 | 0.56 | 40.0 | 4.30e-01 | 77.2% | 92.0% |
| 2ymaA00 | 3.10.310.60 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.56 | 47.0 | 4.17e-01 | 93.5% | 75.6% |
| 2cs0A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.54 | 45.0 | 4.54e-01 | 93.5% | 92.6% |
| 1wquA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.53 | 45.0 | 4.24e-01 | 95.7% | 78.9% |
| 5bulA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 43.0 | 2.89e-01 | 91.3% | 59.4% |
| 2abjD02 | 3.20.10.10 | Alpha Beta › Alpha-Beta Barrel › D-amino Acid Aminotransferase; Chain A, domain 2 › D-amino Acid Aminotransferase, subunit A, domain 2 | 0.53 | 43.0 | 3.57e-01 | 92.4% | 78.3% |
| 1lwuC01 | 3.90.215.10 | Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 | 0.52 | 44.0 | 3.76e-01 | 92.4% | 72.2% |
| 1eigA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 34.0 | 3.78e-01 | 84.8% | 86.3% |
| 4esjA01 | 3.40.210.30 | Alpha Beta › 3-Layer(aba) Sandwich › PvuII Endonuclease; Chain A › Dam replacing family, catalytic PD-(D/E)XK domain | 0.52 | 39.0 | 3.32e-01 | 81.5% | 71.8% |
| 5dynA01 | 3.40.50.11970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 43.0 | 4.11e-01 | 90.2% | 86.8% |
| 4pz6A02 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.51 | 36.0 | 2.77e-01 | 75.0% | 77.1% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3958547 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.81 | 56.0 | 6.53e-01 | 71.7% | 100.0% |
| 4303964 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.80 | 57.0 | 6.39e-01 | 72.8% | 100.0% |
| 4605985 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.76 | 48.0 | 5.66e-01 | 79.3% | 93.7% |
| 4058737 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.74 | 46.0 | 5.54e-01 | 83.7% | 96.7% |
| 4620744 | 1.1.9.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 | 0.73 | 46.0 | 5.42e-01 | 79.3% | 96.7% |
| 144031 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.73 | 51.0 | 4.22e-01 | 72.8% | 99.4% |
| 4103393 | 1.1.9.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 | 0.71 | 45.0 | 5.25e-01 | 79.3% | 96.7% |
| 4370928 | 1.1.9.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 | 0.71 | 47.0 | 5.41e-01 | 79.3% | 96.9% |
| 4054728 | 1.1.9.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 | 0.71 | 45.0 | 5.30e-01 | 77.2% | 98.3% |
| 4139909 | 1.1.9.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 | 0.71 | 46.0 | 5.35e-01 | 79.3% | 96.9% |
| 4362623 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.70 | 46.0 | 5.26e-01 | 79.3% | 96.9% |
| 4480273 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.68 | 46.0 | 5.28e-01 | 76.1% | 96.9% |
| 186 | 1.1.9.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_3 | 0.68 | 48.0 | 5.40e-01 | 84.8% | 100.0% |
| 5011405 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.67 | 46.0 | 5.11e-01 | 71.7% | 92.9% |
| 4312009 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.66 | 46.0 | 5.13e-01 | 71.7% | 98.6% |
| 3590925 | 1.1.9.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_3 | 0.64 | 44.0 | 4.97e-01 | 77.2% | 100.0% |
| 869287 | 1.1.9.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_3 | 0.64 | 47.0 | 5.17e-01 | 82.6% | 100.0% |
| 150962 | 1.1.9.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_3 | 0.62 | 45.0 | 4.96e-01 | 88.0% | 100.0% |
| 4498362 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.62 | 44.0 | 4.36e-01 | 72.8% | 83.2% |
| 4956000 | 1.1.9.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_3 | 0.62 | 44.0 | 4.90e-01 | 81.5% | 100.0% |
| 4932684 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.61 | 45.0 | 4.91e-01 | 77.2% | 97.3% |
| 4928178 | 1.1.9.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › UPF0113 | 0.61 | 43.0 | 3.54e-01 | 72.8% | 85.3% |
| 5011041 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.61 | 45.0 | 4.64e-01 | 77.2% | 98.8% |
| 4990786 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.60 | 42.0 | 3.65e-01 | 73.9% | 84.0% |
| 3600186 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.60 | 46.0 | 4.61e-01 | 82.6% | 88.4% |
| 187 | 1.1.9.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_3 | 0.60 | 44.0 | 4.74e-01 | 84.8% | 100.0% |
| 4950281 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.59 | 40.0 | 4.35e-01 | 70.7% | 100.0% |
| 5071049 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.59 | 41.0 | 4.41e-01 | 71.7% | 100.0% |
| 4963284 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.58 | 43.0 | 4.63e-01 | 79.3% | 97.3% |
| 4024158 | 1.1.9.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_3 | 0.58 | 45.0 | 4.81e-01 | 84.8% | 100.0% |
| 4997514 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.56 | 41.0 | 4.22e-01 | 79.3% | 91.1% |
| 3573602 | 223.3.1.15 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase, PF30382, PF30384 | 0.55 | 45.0 | 2.97e-01 | 90.2% | 53.1% |
| 4995302 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.55 | 42.0 | 3.50e-01 | 82.6% | 88.2% |
| 3200211 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.50 | 38.0 | 2.96e-01 | 80.4% | 80.0% |
| 4591781 | 2004.1.1.1117 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF2478 | 0.50 | 40.0 | 3.26e-01 | 100.0% | 46.5% |
D3
medium
residues 243-284_738-795
Domain cluster:
rep: PFI1-like_helicase__YP_009165351__Mollivirus_sibericum_Viruses.__X__D79-121_174-188_227-243_261-284_590-602
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02562.23 best | PhoH | 32.4 | 9.20e-08 | 43.0% | 19.0% |
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3b85A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.73 | 69.0 | 5.43e-01 | 100.0% | 90.4% |
| 2orwB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.71 | 57.0 | 5.18e-01 | 84.0% | 99.2% |
| 6ln3A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 55.0 | 4.42e-01 | 100.0% | 75.2% |
| 6wctD01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 49.0 | 4.35e-01 | 100.0% | 59.2% |
| 1f20A01 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.61 | 53.0 | 4.50e-01 | 95.0% | 96.3% |
| 2yogA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 53.0 | 4.24e-01 | 100.0% | 71.6% |
| 2qorA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 50.0 | 4.55e-01 | 100.0% | 70.8% |
| 5uivA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 51.0 | 3.96e-01 | 100.0% | 74.2% |
| 1g5hB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.57 | 38.0 | 3.73e-01 | 88.0% | 62.6% |
| 1dbrC00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 50.0 | 3.86e-01 | 97.0% | 61.9% |
| 2vf8B04 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 48.0 | 3.92e-01 | 97.0% | 79.6% |
| 5agaA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 43.0 | 3.52e-01 | 84.0% | 85.1% |
| 2h92A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 50.0 | 3.91e-01 | 100.0% | 80.6% |
| 4pg4A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 45.0 | 3.88e-01 | 89.0% | 83.7% |
| 3cwqA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 48.0 | 3.79e-01 | 95.0% | 51.7% |
| 3i6dA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 44.0 | 3.86e-01 | 88.0% | 86.6% |
| 3n0xA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 41.0 | 3.24e-01 | 86.0% | 38.2% |
| 2jgdA04 | 3.40.50.11610 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain | 0.55 | 38.0 | 3.33e-01 | 98.0% | 45.9% |
| 1xjcA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 44.0 | 3.92e-01 | 87.0% | 78.5% |
| 2ejwA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 43.0 | 3.64e-01 | 88.0% | 76.9% |
| 3lp5A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 46.0 | 3.48e-01 | 95.0% | 72.0% |
| 2jzdA01 | 3.40.220.20 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Nsp3, SUD-M subdomain | 0.54 | 38.0 | 3.62e-01 | 99.0% | 60.0% |
| 4n82B00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.54 | 44.0 | 3.83e-01 | 89.0% | 85.6% |
| 4ycsA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 43.0 | 4.01e-01 | 84.0% | 83.7% |
| 3bmxA02 | 3.40.50.1700 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycoside hydrolase family 3 C-terminal domain | 0.53 | 43.0 | 3.39e-01 | 89.0% | 64.1% |
| 4b3xA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 43.0 | 3.64e-01 | 98.0% | 51.7% |
| 2napA03 | 3.40.228.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dimethylsulfoxide Reductase; domain 2 › Dimethylsulfoxide Reductase, domain 2 | 0.53 | 42.0 | 3.22e-01 | 86.0% | 75.6% |
| 2wteA01 | 3.40.50.11700 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 37.0 | 3.43e-01 | 86.0% | 54.3% |
| 1jqkA02 | 3.40.50.2030 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 42.0 | 3.61e-01 | 89.0% | 69.2% |
| 2o20A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 41.0 | 3.76e-01 | 86.0% | 71.5% |
| 3pnxA00 | 3.40.1260.10 | Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Ychn; Chain: A, › DsrEFH-like | 0.52 | 40.0 | 3.51e-01 | 84.0% | 97.5% |
| 4kmrA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 35.0 | 3.27e-01 | 87.0% | 54.4% |
| 1zwkA00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.52 | 43.0 | 3.68e-01 | 93.0% | 84.0% |
| 2pjuC01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 40.0 | 4.00e-01 | 89.0% | 81.0% |
| 1d5rA01 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.52 | 40.0 | 3.35e-01 | 83.0% | 75.9% |
| 2fm7A00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.51 | 29.0 | 3.42e-01 | 80.0% | 87.1% |
| 7o0aD01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.51 | 46.0 | 3.57e-01 | 100.0% | 46.8% |
| 3sggA02 | 3.20.20.490 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › GxGYxYP glycoside hydrolase, C-terminal domain | 0.51 | 39.0 | 3.04e-01 | 86.0% | 81.9% |
| 4rk0D01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 41.0 | 3.76e-01 | 89.0% | 77.0% |
| 1itzA03 | 3.40.50.920 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 43.0 | 3.93e-01 | 91.0% | 73.2% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3971494 | 2004.1.1.89 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PhoH | 0.97 | 91.0 | 6.73e-01 | 97.0% | 85.9% |
| 3956232 | 2004.1.1.89 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PhoH | 0.93 | 89.0 | 6.45e-01 | 100.0% | 77.0% |
| 3959799 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.86 | 81.0 | 6.01e-01 | 100.0% | 82.6% |
| 1005522 | 2004.1.1.226 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADDB_N | 0.73 | 67.0 | 4.65e-01 | 99.0% | 96.4% |
| 3334202 | 2004.1.1.135 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PIF1 | 0.72 | 60.0 | 5.27e-01 | 89.0% | 83.4% |
| 3712546 | 2004.1.1.181 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_7 | 0.70 | 57.0 | 4.66e-01 | 87.0% | 90.6% |
| 4546375 | 2004.1.1.226 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADDB_N | 0.69 | 62.0 | 4.41e-01 | 99.0% | 100.0% |
| None | — | 0.69 | 58.0 | 3.90e-01 | 89.0% | 55.3% | |
| 5010471 | 2004.1.1.343 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_14 | 0.68 | 55.0 | 4.37e-01 | 86.0% | 70.8% |
| 3372759 | 2004.1.1.135 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PIF1 | 0.68 | 62.0 | 4.50e-01 | 100.0% | 39.3% |
| 4969465 | 2004.1.1.343 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_14 | 0.67 | 62.0 | 4.37e-01 | 100.0% | 60.0% |
| 4248117 | 2004.1.1.28 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TK | 0.67 | 59.0 | 5.22e-01 | 94.0% | 98.6% |
| 3181663 | 2004.1.1.189 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_16 | 0.67 | 54.0 | 4.38e-01 | 87.0% | 88.9% |
| 3389398 | 2004.1.1.45 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MutS_V | 0.66 | 60.0 | 4.26e-01 | 100.0% | 57.4% |
| 3605422 | 2004.1.1.28 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TK | 0.66 | 59.0 | 4.99e-01 | 94.0% | 87.7% |
| 3650238 | 2004.1.1.56 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC | 0.65 | 53.0 | 4.73e-01 | 86.0% | 87.4% |
| 3272818 | 2004.1.1.47 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › G-alpha | 0.65 | 53.0 | 4.10e-01 | 100.0% | 41.6% |
| 3885891 | 2004.1.1.130 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NACHT | 0.64 | 52.0 | 3.88e-01 | 86.0% | 66.0% |
| 3253840 | 2004.1.1.364 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C | 0.64 | 59.0 | 3.70e-01 | 100.0% | 72.3% |
| 4473494 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.63 | 53.0 | 3.81e-01 | 90.0% | 86.3% |
| 3941347 | 2004.1.1.163 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › KTI12 | 0.63 | 57.0 | 4.72e-01 | 100.0% | 75.6% |
| 3494824 | 2004.1.1.112 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › P-mevalo_kinase | 0.63 | 58.0 | 4.60e-01 | 100.0% | 76.4% |
| 5066468 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.63 | 52.0 | 3.89e-01 | 92.0% | 76.6% |
| 4842242 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.62 | 51.0 | 3.55e-01 | 91.0% | 41.3% |
| 3569765 | 2004.1.1.51 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sulfotransfer_1 | 0.62 | 56.0 | 3.96e-01 | 100.0% | 40.9% |
| 4953123 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.61 | 50.0 | 3.32e-01 | 89.0% | 97.3% |
| None | — | 0.60 | 54.0 | 3.90e-01 | 100.0% | 43.2% | |
| 5017003 | 2003.1.10.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain | 0.60 | 36.0 | 3.86e-01 | 87.0% | 69.4% |
| 3879418 | 2004.1.1.118 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AIG1 | 0.59 | 50.0 | 4.73e-01 | 100.0% | 78.3% |
| 3181264 | 7514.1.1.0 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain | 0.59 | 47.0 | 3.97e-01 | 86.0% | 78.2% |
| 3590619 | 2007.2.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like | 0.58 | 40.0 | 4.17e-01 | 88.0% | 77.4% |
| 3591986 | 2003.1.5.176 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › BMT5-like | 0.57 | 49.0 | 3.56e-01 | 97.0% | 64.9% |
| 4514314 | 7514.1.1.1 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 | 0.57 | 51.0 | 4.20e-01 | 98.0% | 96.1% |
| 3917662 | 2004.1.1.118 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AIG1 | 0.57 | 51.0 | 3.35e-01 | 100.0% | 71.0% |
| 3813073 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.57 | 50.0 | 4.07e-01 | 98.0% | 52.6% |
| 5064817 | 2004.1.1.97 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MobB | 0.56 | 46.0 | 4.06e-01 | 86.0% | 78.6% |
| 3248152 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.56 | 45.0 | 3.47e-01 | 87.0% | 64.0% |
| 4990367 | 2004.1.1.97 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MobB | 0.55 | 45.0 | 3.95e-01 | 88.0% | 79.3% |
| 3611032 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 43.0 | 3.29e-01 | 100.0% | 35.8% |
| 4025645 | 2004.1.1.16 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf | 0.54 | 46.0 | 3.83e-01 | 100.0% | 52.8% |
| 4963061 | 2007.1.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › GATase | 0.54 | 43.0 | 3.30e-01 | 86.0% | 85.8% |
| 4973244 | 2004.1.1.97 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MobB | 0.54 | 44.0 | 3.73e-01 | 88.0% | 79.1% |
| 3895899 | 2004.1.1.118 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AIG1 | 0.53 | 46.0 | 3.81e-01 | 100.0% | 51.6% |
| 3599180 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.53 | 41.0 | 3.17e-01 | 81.0% | 46.7% |
| 3499930 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.52 | 45.0 | 3.31e-01 | 100.0% | 64.0% |
| 3643123 | 3676.1.1.0 ↗ | alpha duplicates or obligate multimers › RNA helicase Hera dimerization domain › RNA helicase Hera dimerization domain › RNA helicase Hera dimerization domain | 0.51 | 43.0 | 3.07e-01 | 94.0% | 61.8% |
| 3406789 | 7516.1.1.0 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases | 0.51 | 42.0 | 3.26e-01 | 90.0% | 100.0% |
| 4971716 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.51 | 41.0 | 3.69e-01 | 88.0% | 77.6% |
| 3320834 | 2005.1.1.41 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CHX17_C | 0.51 | 42.0 | 3.72e-01 | 94.0% | 92.3% |
D4
medium
residues 285-341_615-651
Domain cluster:
rep: NC_052663.1__YP_009987405.1__JR328_gp161__00196__D254-312_575-608
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1am2A00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.90 | 77.0 | 5.99e-01 | 89.4% | 100.0% |
| 6vgwA01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.88 | 74.0 | 6.28e-01 | 87.2% | 97.9% |
| 1mi8A00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.88 | 76.0 | 6.47e-01 | 90.4% | 98.6% |
| 1dfaA01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.88 | 74.0 | 5.61e-01 | 88.3% | 100.0% |
| 1at0A00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.88 | 74.0 | 6.27e-01 | 88.3% | 98.6% |
| 6zgqA01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.87 | 72.0 | 6.05e-01 | 86.2% | 100.0% |
| 2lwyA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.86 | 76.0 | 6.54e-01 | 92.6% | 100.0% |
| 2imzA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.85 | 69.0 | 5.93e-01 | 86.2% | 100.0% |
| 4e2tB00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.81 | 67.0 | 5.45e-01 | 88.3% | 100.0% |
| 1iz6A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 43.0 | 4.99e-01 | 72.3% | 92.8% |
| 6oqrA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.53 | 36.0 | 3.69e-01 | 85.1% | 73.3% |
| 2lt1A00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.52 | 35.0 | 3.81e-01 | 72.3% | 85.3% |
| 6jhpA01 | 2.70.98.60 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis | 0.52 | 40.0 | 2.87e-01 | 84.0% | 90.6% |
| 4iyqA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 40.0 | 3.89e-01 | 91.5% | 75.7% |
ECOD (65)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4180552 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.95 | 81.0 | 6.46e-01 | 88.3% | 100.0% |
| 4544734 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.91 | 77.0 | 5.69e-01 | 87.2% | 99.5% |
| 5035476 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.91 | 81.0 | 6.56e-01 | 92.6% | 100.0% |
| 3174953 | 69.1.1.2 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hom_end_hint | 0.90 | 76.0 | 5.47e-01 | 87.2% | 100.0% |
| 2553113 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.90 | 79.0 | 6.97e-01 | 91.5% | 100.0% |
| 4994372 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.90 | 74.0 | 6.67e-01 | 85.1% | 100.0% |
| 4993732 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.90 | 77.0 | 6.84e-01 | 89.4% | 97.6% |
| 4946209 | 69.1.1.18 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › DNA_topoisoIV | 0.89 | 76.0 | 5.67e-01 | 88.3% | 100.0% |
| 3949431 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.89 | 75.0 | 6.29e-01 | 88.3% | 100.0% |
| 3861422 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.88 | 76.0 | 5.86e-01 | 90.4% | 77.4% |
| 4933756 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.88 | 73.0 | 6.29e-01 | 87.2% | 100.0% |
| 3877825 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.88 | 77.0 | 5.71e-01 | 91.5% | 73.3% |
| 4996523 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.88 | 78.0 | 5.86e-01 | 92.6% | 100.0% |
| 2546507 | 69.1.1.2 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hom_end_hint | 0.88 | 74.0 | 6.29e-01 | 88.3% | 100.0% |
| 3234017 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.88 | 73.0 | 5.82e-01 | 87.2% | 89.0% |
| 3934143 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.88 | 74.0 | 6.34e-01 | 88.3% | 100.0% |
| 2675767 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.88 | 76.0 | 6.25e-01 | 90.4% | 98.1% |
| 3230518 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.88 | 74.0 | 6.10e-01 | 88.3% | 98.1% |
| 4243055 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.88 | 78.0 | 5.96e-01 | 93.6% | 75.4% |
| 3963364 | 69.1.1.3 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › PT-HINT | 0.88 | 75.0 | 6.32e-01 | 89.4% | 98.6% |
| 2636473 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.87 | 76.0 | 6.42e-01 | 91.5% | 97.9% |
| 3215378 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.87 | 72.0 | 5.98e-01 | 86.2% | 98.0% |
| 4997597 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.87 | 77.0 | 6.44e-01 | 93.6% | 100.0% |
| 4565870 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.87 | 76.0 | 6.28e-01 | 92.6% | 98.1% |
| 4667152 | 69.1.1.3 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › PT-HINT | 0.87 | 76.0 | 6.24e-01 | 92.6% | 97.5% |
| 4457379 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.86 | 73.0 | 6.22e-01 | 89.4% | 93.8% |
| 3690149 | 69.1.1.5 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Vint | 0.86 | 74.0 | 5.84e-01 | 89.4% | 65.5% |
| 259963 | 69.1.1.3 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › PT-HINT | 0.86 | 76.0 | 6.54e-01 | 92.6% | 100.0% |
| 3952464 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.86 | 75.0 | 6.39e-01 | 92.6% | 96.6% |
| 3949584 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.86 | 73.0 | 6.12e-01 | 89.4% | 100.0% |
| 3282306 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.86 | 72.0 | 6.26e-01 | 88.3% | 100.0% |
| 4941327 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.86 | 67.0 | 5.70e-01 | 81.9% | 100.0% |
| 5030847 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.86 | 76.0 | 6.26e-01 | 94.7% | 96.9% |
| 4945569 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.85 | 75.0 | 6.19e-01 | 92.6% | 98.1% |
| 5032319 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.85 | 72.0 | 6.06e-01 | 89.4% | 100.0% |
| 3602706 | 69.1.1.3 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › PT-HINT | 0.84 | 74.0 | 6.38e-01 | 92.6% | 100.0% |
| 5012699 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.84 | 70.0 | 5.62e-01 | 87.2% | 100.0% |
| 5065932 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.84 | 70.0 | 6.06e-01 | 88.3% | 98.6% |
| 4045174 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.84 | 73.0 | 5.92e-01 | 92.6% | 98.8% |
| 4680886 | 69.1.1.14 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint_2 | 0.84 | 72.0 | 5.81e-01 | 90.4% | 99.4% |
| 4127166 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.83 | 70.0 | 5.86e-01 | 88.3% | 100.0% |
| 5014852 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.83 | 71.0 | 6.05e-01 | 90.4% | 97.9% |
| 4586920 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.83 | 71.0 | 5.90e-01 | 90.4% | 100.0% |
| 2701967 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.83 | 70.0 | 6.08e-01 | 89.4% | 100.0% |
| 4992473 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.83 | 78.0 | 6.23e-01 | 100.0% | 97.1% |
| 5035795 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.83 | 71.0 | 6.07e-01 | 91.5% | 100.0% |
| 4934481 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.83 | 69.0 | 5.78e-01 | 87.2% | 100.0% |
| 4950409 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.83 | 73.0 | 6.10e-01 | 94.7% | 98.1% |
| 4291841 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.82 | 67.0 | 5.47e-01 | 86.2% | 100.0% |
| 3603108 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.82 | 70.0 | 5.99e-01 | 91.5% | 98.6% |
| 4940943 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.82 | 71.0 | 5.68e-01 | 91.5% | 98.8% |
| 4997601 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.81 | 66.0 | 5.74e-01 | 86.2% | 100.0% |
| 4500960 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.81 | 67.0 | 5.72e-01 | 87.2% | 100.0% |
| 5013937 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.81 | 71.0 | 5.81e-01 | 93.6% | 100.0% |
| 5037092 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.80 | 56.0 | 6.41e-01 | 87.2% | 95.7% |
| 4152516 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.80 | 65.0 | 5.70e-01 | 86.2% | 100.0% |
| 4932851 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.78 | 68.0 | 5.93e-01 | 92.6% | 99.3% |
| 3603738 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.77 | 65.0 | 5.63e-01 | 89.4% | 100.0% |
| 4404140 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.77 | 66.0 | 5.31e-01 | 92.6% | 98.3% |
| 4930925 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.77 | 65.0 | 5.63e-01 | 91.5% | 99.3% |
| 4322985 | 2004.1.1.14 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU | 0.73 | 62.0 | 4.12e-01 | 91.5% | 38.0% |
| 4416649 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.65 | 54.0 | 4.68e-01 | 89.4% | 97.2% |
| 1758564 | 69.1.1.2 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hom_end_hint | 0.58 | 50.0 | 4.01e-01 | 91.5% | 98.9% |
| 4319097 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 31.0 | 3.80e-01 | 83.0% | 91.4% |
| 3585212 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.50 | 36.0 | 2.76e-01 | 77.7% | 32.6% |
D5
medium
residues 342-408
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2jmzA01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.81 | 56.0 | 4.10e-01 | 95.5% | 28.6% |
| 4lx3A00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.80 | 52.0 | 4.53e-01 | 94.0% | 44.6% |
| 1kl7A01 | 3.90.1380.10 | Alpha Beta › Alpha-Beta Complex › threonine synthase, domain 1, chain A › Threonine synthase, N-terminal domain | 0.55 | 35.0 | 3.19e-01 | 71.6% | 45.2% |
| 1a8dA02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.54 | 42.0 | 3.16e-01 | 92.5% | 96.6% |
| 4dovA00 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.52 | 42.0 | 3.30e-01 | 94.0% | 74.5% |
| 4eyyQ02 | 3.20.170.50 | Alpha Beta › Alpha-Beta Barrel › ADP-ribosylation fold › Dot/Icm secretion system IcmQ, C-terminal domain | 0.50 | 34.0 | 2.91e-01 | 70.1% | 93.9% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4180552 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.94 | 85.0 | 6.13e-01 | 95.5% | 47.3% |
| 5023539 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.84 | 57.0 | 4.25e-01 | 94.0% | 30.3% |
| 4944478 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.84 | 57.0 | 4.60e-01 | 92.5% | 39.2% |
| 4970868 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.84 | 56.0 | 4.44e-01 | 92.5% | 36.8% |
| 4993813 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.80 | 59.0 | 4.40e-01 | 100.0% | 32.5% |
| 4978364 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.78 | 62.0 | 5.12e-01 | 97.0% | 49.6% |
| 4045174 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.74 | 57.0 | 4.21e-01 | 95.5% | 33.3% |
| 3511246 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.68 | 55.0 | 4.10e-01 | 97.0% | 35.8% |
| 4999893 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.66 | 57.0 | 4.67e-01 | 92.5% | 99.1% |
| 4993808 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.56 | 42.0 | 3.23e-01 | 79.1% | 56.6% |
| 3242528 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.56 | 34.0 | 3.53e-01 | 88.1% | 63.1% |
| 3609825 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.53 | 36.0 | 3.21e-01 | 73.1% | 82.7% |
| 3791485 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.51 | 43.0 | 3.01e-01 | 100.0% | 63.1% |
| 3917008 | 382.1.1.2 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Toxin_TOLIP | 0.51 | 35.0 | 3.39e-01 | 73.1% | 67.5% |
| 4505851 | 375.1.1.18 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › SIR2 | 0.50 | 41.0 | 2.92e-01 | 95.5% | 72.1% |
D6
medium
residues 409-505
Domain cluster:
rep: SRR1747018_scaffold_2_1202_curated_prodigal-single.1__X__X__00321__D263-358
D7
medium
residues 506-614
Domain cluster:
rep: IMGVR_UViG_3300045988_178991-3300045988-Ga0495776_136811_42162_44546__D269-361
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF14528.12 best | LAGLIDADG_3 | 39.5 | 7.30e-10 | 67.9% | 80.5% |